| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3603 |
|---|
| Symbol | gyrB |
|---|
| ID | 4182202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3884394 |
|---|
| End bp | 3886841 |
|---|
| Gene Length | 2448 bp |
|---|
| Protein Length | 815 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069496 |
|---|
| Product | DNA gyrase subunit B |
|---|
| Protein accession | YP_676137 |
|---|
| Protein GI | 110635929 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCTA CGCCAGAAAG ACTCAACGGC GAACCGGCCG AATACGGCGC CGAATCCATC
AAAGTTCTCA AGGGCTTGGA TGCCGTCCGC AAGCGGCCGG GCATGTATAT CGGCGACACT
GATGACGGCT CTGGCCTGCA TCATATGGTC TATGAGGTGG TGGATAACGC CATTGACGAG
GCGCTGGCGG GTTATGCTTC CCTCGTCACC GTGTCGCTTA ATCCCGACGG TTCCTGCACC
GTGACCGACA ATGGCCGCGG TATTCCGACG GATATTCACG CAGGCGAGGG CGTTTCCGCG
GCCGAGGTCA TCATGACCCA GCTGCATGCC GGCGGCAAGT TTGACCAGAA TTCCTATAAG
GTTTCCGGCG GCCTGCATGG CGTGGGCGTT TCTGTTGTGA ATGCGCTTTC GACCTGGCTC
AAGCTGAAGA TCCGCCGCAA AGGACAGATC CATGAAATGA GCTTCAGTCA CGGGGTGCCC
GATGCACCCC TGGCCGTAAC GGGCGATGCA GGCGAGGAAA CCGGCACGGA GGTGACCTTC
CTGCCGTCGC CGGAAACCTT CACGAAAACC GATTTCGATT ACGCCACGCT GGAGCATCGC
CTGCGCGAGC TCGCCTTCCT CAATTCCGGC GTGCGCATCC TGCTCTCAGA CCGCCGCCAT
GCCGATTTGA AGGAGCAGCA ATTCCTTTAC GACGGCGGCA TCATCGAATT CGTGAAATAT
CTCGATCGGG CCAAGAAGCC GCTGATCCCC GAGCCGATCT CCATTTCCGG AGAGCGGGAT
GGAATCACGG TCGAGCTCGC CATGTGGTGG AACGATTCTT ACCACGAGAA CGTGCTTGCC
TTCACCAACA ACATTCCCCA GCGCGACGGC GGCACGCATA TGGCGGGCTT CCGCGGTGCG
CTGACGCGGC AGGTGACCTC TTATGCGGAC GTCTCCGGCC TCACGAAGAA AGAAAAGGTG
TCGCTCACCG GCGATGATTG CCGTGAAGGG CTTTCGGCGG TGCTTTCCGT GAAGGTGCCG
GATCCGAAGT TCTCATCGCA AACCAAGGAC AAGCTGGTCT CGTCCGAAGT GCGTCCGGTC
GTGGAGAGTC TTGTCAACGA AGCGCTGGGC ACATGGCTCG AAGAGCACCC GGCGGAAGCG
AAGATCCTGG TCGGCAAGGT GGTCGAAGCC GCTGCGGCGC GCGAGGCGGC GCGCAAAGCG
CGCGAACTCA CCCGCCGCAA GGGCGTGCTC GACATCACGT CGCTTCCCGG GAAGCTTGCG
GACTGTCAGG AAAGGGACCC GGCGAAATCG GAACTCTTCA TCGTCGAGGG TGACTCGGCC
GGCGGCTCGG CCAAGAGCGG ACGTTCGCGC AAGAACCAGG CCATCCTGCC GCTGCGCGGC
AAGATCCTGA ACGTGGAGCG GGCGCGCTTC GACCGCATGC TCTCCTCCGA CATGATCGGC
ACGCTGATCA CCGCGCTCGG CACCGGCATC GGCAAGGACG AGTTCAATGC CGATAAGCTG
CGCTACCACA AGATCATCAT CATGACGGAC GCCGACGTGG ACGGCGCCCA TATCCGTACG
CTCCTGCTCA CCTTCTTCTT CCGGCAGATG CCGGAGCTGA TCGAGCGCGG GCATCTCTAT
ATCGCCCAGC CGCCACTCTA CAAGGTCACG CGTGGCAAAT CCGTGCAGTA CATCAAGGAC
GAAGCGGCGT TCGAAGAATT CCTGATCGAT ACCGGCCTGC AGGAGGCTGC GCTGGAGCTT
TCGACCGGCG AGGTCCGCTC CGGCCAGGAT TTGAAGCAGG TCATCGAGGA TGCGCGCGCC
GTCCGTTCGC TCATCAATGG CCTACACACG CGCTACGACC GTACTGTGGT GGAACAGGCG
GCGATCGCCG GCGCGCTGAA TGCAGCCGTG CTCGCCGATC CGGGGCGGTC CGCGGAAGCC
GCTGCTTACG TGGCGCGGCG TCTCGACATG ATTTCTGAAG AAACGGAGCG CGGCTGGCAG
GGCCGGGTGA ACCCCTCCAA CGAGGGCGCC GGCGGTTATC TCTTCGAGCG CACGGTGCGC
GGCGTGCGCG ATGTCGTGAT CCTCGACGCC GCGCTGATCG GCTCGGCCGA CTCCCGCGCA
ATCGACCGCT ATACCCCGCG CCTGCAAGAG GTTTTCGCAA TGCCCCCGGT GCTTCGGCGC
AACGACAAGT CGGAGACGGT CTCTGGTCCG ATGGCACTGC TCGATGCGGT TTTCGCCACC
GGACGCAAGG GCCTCACCAT GCAGCGCTAC AAAGGTCTTG GCGAGATGAA TGCCGAGCAG
CTTTGGGAGA CCACGCTCGA CCCCGACGCC CGGTCGCTGT TGCAGGTGAA GGTTCCAGAC
GCCACGGATG CCGATGCGCT CTTCGCGCGC CTGATGGGAG ACGAAGTGGA GCCGCGCCGC
GATTTCATCC AGGAAAACGC GCTGTCGGTC GCCAATCTGG ACGTGTAG
|
|---|
| Protein sequence | MSATPERLNG EPAEYGAESI KVLKGLDAVR KRPGMYIGDT DDGSGLHHMV YEVVDNAIDE
ALAGYASLVT VSLNPDGSCT VTDNGRGIPT DIHAGEGVSA AEVIMTQLHA GGKFDQNSYK
VSGGLHGVGV SVVNALSTWL KLKIRRKGQI HEMSFSHGVP DAPLAVTGDA GEETGTEVTF
LPSPETFTKT DFDYATLEHR LRELAFLNSG VRILLSDRRH ADLKEQQFLY DGGIIEFVKY
LDRAKKPLIP EPISISGERD GITVELAMWW NDSYHENVLA FTNNIPQRDG GTHMAGFRGA
LTRQVTSYAD VSGLTKKEKV SLTGDDCREG LSAVLSVKVP DPKFSSQTKD KLVSSEVRPV
VESLVNEALG TWLEEHPAEA KILVGKVVEA AAAREAARKA RELTRRKGVL DITSLPGKLA
DCQERDPAKS ELFIVEGDSA GGSAKSGRSR KNQAILPLRG KILNVERARF DRMLSSDMIG
TLITALGTGI GKDEFNADKL RYHKIIIMTD ADVDGAHIRT LLLTFFFRQM PELIERGHLY
IAQPPLYKVT RGKSVQYIKD EAAFEEFLID TGLQEAALEL STGEVRSGQD LKQVIEDARA
VRSLINGLHT RYDRTVVEQA AIAGALNAAV LADPGRSAEA AAYVARRLDM ISEETERGWQ
GRVNPSNEGA GGYLFERTVR GVRDVVILDA ALIGSADSRA IDRYTPRLQE VFAMPPVLRR
NDKSETVSGP MALLDAVFAT GRKGLTMQRY KGLGEMNAEQ LWETTLDPDA RSLLQVKVPD
ATDADALFAR LMGDEVEPRR DFIQENALSV ANLDV
|
|---|
| |