| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3580 |
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| Symbol | |
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| ID | 4181409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3854482 |
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| End bp | 3857610 |
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| Gene Length | 3129 bp |
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| Protein Length | 1042 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638069473 |
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| Product | DNA helicase/exodeoxyribonuclease V, subunit B |
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| Protein accession | YP_676114 |
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| Protein GI | 110635906 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3893] Inactivated superfamily I helicase |
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| TIGRFAM ID | [TIGR02786] double-strand break repair protein AddB, alphaproteobacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.412943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCACGG AACGAAATAG CCCGCGCGTC TTTTCCATTC CCCCCGGCGT GCCGTTTTTG
CCGGCTCTTG CCGACGCGCT GCTCCAGGGT CGCCTGGTGC CCGGCTTCCG CTATGATGGC
GACCCGCTTT CGCTCGCCGA CGCCACGATT TACCTTCCCA CCCGCCGCGC GGCACGGGAG
CTGAGAAGCG TCTTCGTCGA CCGTCTTGGG GGTGTGTCCG CCATCCTCCC CGTCATCCGC
CCGCTTGGTG AGTTCGAGGC TGAGCTGGCC GATTTGAGCG ATGAAGGCGG CGCTGCTCAA
CTTGACCATG CGCCACCCAT TCCCAAGCTT GACCGCATCC TCCTCCTTGG AAGCCTCGCG
CAGGCGTGGA AGGCGCGCGT GCCTGCGCAT GTGGCCGCTC GCTTTGAGGA AGGTGTGATC
GTGCCCGCCT CCCTGAGCGA CGGCCTTTGG CTTGCGCGCG ACCTGGCCGC TCTCATGGAC
GAGATCGAGA CCGAGGAGGG TGACTGGAGC CGGCTTGCCG AACTCGTGCC GGAGGAGCTT
GCCGGCTGGT GGCAGGTGAT GCTCGAATTC CTTAATATCG TTACCAGGGC CTGGCCTGAA
CTGCTTGCCG AGCGAGACCG CTCAAACCCC GCCACGCACC GCAATGCAAT GCTCGCAGCC
GAGGCTGCCC GGCTCATGCG AACCCCACCG CGGGGACCTG TCATCGCGGC TGGGTCTACG
GGCTCAATCC CGGCAACCGC ACGACTGCTC GGCACCATTG CCCGGCTCGA AAACGGCGCC
GTGGTTCTGC CGGGGCTCGA CCTCAATCTG GACGAAGATT CCTGGCGCGC GGTCGGTGCA
ATCGAAGGGC CATCCGCTTG CGGGCATCCG CAGTTCGGCC TCAGGAAGCT GATCGGGACC
ATCGGCGTGG CGCGCGCGCA GGTTCTGGAG CTTGCTGCGC CGGCCCCGGA GCTTGCCGCT
CGCCGCCAGC TCCTGAGCGA GGCGATGCGG CCGGCCGATA CCACCGATCT TTGGGCGTTA
AATCGCTCGA TGGTCGACCG GGCGCTATCG CAAGGTGCGC TTGCCGGCGT CAGTCTGATC
GAGGCTGCGA ACGAACGGGA CGAGGCGGCG GCAATTGCCG TCGCCCTGCG CCACGCCATT
GCCCGAGAGG GGACAACGGC GGCATTGGTC ACACCCAACA GAACATTGGC GCGCCGGGTG
GCCGCCGAAC TCAAACGGTT TGGTATCCGT GCCGACGACT CTGGCGGAAG CCTGCTTGCC
GACAGCGTGC CCGCCACACT GCTCCGCCTG ATGCTGGAGG CCATCTGCCG GCCGAAGGAA
CCGGTGGTAA TCGTGGGGCT CTTGAAGCAT CCACTGCTTC GCCTGGGCTT GCCGAGAGAG
CGCGTGCGCC GCGCTGCCGA GGTGATCGAG CTGATGGCCT TGCGCGGCGG AACAGGCCGG
CCTGACGTGG CAACGCTGTC TAGCCTCTTC GCCCAGCGCC ATGATGCGAT GATGCGCGAT
CCTCGCAAGC CGTTCTGGCT AAGCCGGCTA AGCGCTTCCG ATATCGCCGA AGCTCGCCAG
GTGCTTGCCG CCCTGGAACA GGCAATCGTC CCGCTCTCCA GCCTGCGGGA GGCAGCTGCT
GTCGGCCTGT CCCTATTGGC GCGCGCCTCG GTGGAAGCGT TTGAAGCGCT GGCAAGGGAT
GAGGACGGAA CGCTCAACGA ACTCTACCGG GGCGAGGCGG GCGAGGCCCT TGCCCGCTTC
CTTCGGGATC TGGTGGAGTG CCGGACCGGC ACGAAGGCGG AGATTTCCGA ATGGCCGGAC
GTTTTCGCCG CCCTGATGGC GGGCGAGGTC GTGAAACCCG CCATGGGCGC CGACCAGCGC
ATCGCCATCT GGGGCGCGCT GGAGGCCCGC CTGCAAAGCG TCGATATGCT CGTATTGGGC
GGACTTAATG AAGGCACGTG GCCGGAGGCG CCGCGGTCTG ACCGCTTCAT GTCGCGCCTC
ATGAAAGGTG AGCTCAAGCT GGAGCCGCCG GAGCGGCGCA TCGGCCTTGC CGCGCATGAT
TTCATGATGG CGTTCGGTGC GCCGCAAGTG GTGCTTGCCC GCTCGACCAG ATCGGAGAGC
GCCCCCGCCG TCGCCTCACG CTGGCTGCAG CGGCTTGCCG CCTGCGCCGG GCCATCGGAA
ACCGCCGCCA TGCGCGCGCG CGGCCAGCGC TTTATTGCCT GGGCGCATGC GCTGGAGGCC
CGCGATGACG TGCCTTTTGC TCCCCGCCCC TGCCCCAGGC CGCCGCTCGA GGCGCGGCCA
AAGCGCTTCT CCGTCACCGA AATCGAGACG CTAAGGCGTG ATCCTTATGC CGTGTATGCG
CGGCGAATCC TCAAGCTGAT GCCGCTCGAT CCGCTCATCC GCGATCCGGG CGCCGCAGAA
CGCGGCACCC TGTTTCACGA TATTTTGCAA GCCTTTATCC AATCTGGCGC GGACCCTTCC
GCTCCCGATG CGCTGGAACG GCTGCTCGAT GCCGGAAAAA AGCTGTTTGC AGAAACGAAG
CTCCCGGTTG ATGTGGAGGC GGTCTGGTGG CCGCGTTTTG AGCGCACCGC TTACGGCATC
ATCGGCTGGG AGCGCGGACG CGCGGAAGCC GTTGCCGCTC GGCATGCGGA AATCCGCGCC
TCGGCCATCG AGGTCGGCGC CACTGGCAAG CTGCTTTCGG GCCGCGCTGA CCGTATCGAC
ATCCGCGCGG ATGGAAGCGC CGAGATCATC GACTATAAAA CCGGCTCCAC CCCCTCAAAG
GTGCAGGCAC ACCGGCTTCT TGCCCCGCAG CTTGCCCTTG AAGCAGCGCT TCTTGCCCGC
GGCGCTTTTG TGGAGCTTGG GCAGGCGCAA CCAGCCGAGC TTTGTTATGT GCGGCTGAAG
GCGAATGGCA CCGTGGAGCC GGAATCCATC CTCAAGATCA AGGACAGCGA GAAAGCGGGA
CCCGAAATCG CCGAGGAAGC CTGGCAGCGG CTGGAGCGGC TGCTTGCATG GTACGATAAT
TCGGAAGCCG GCTATCTTTC CCGCGCCTTA CCGTTCAAGG AAGGGGACAC GGAAGGGGAT
TACGACCATC TTGCCCGCGT GCTCGAATGG TCGGCTGGCG GAGATTCCGG AGAAGGGGAG
GCGGAATGA
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| Protein sequence | MSTERNSPRV FSIPPGVPFL PALADALLQG RLVPGFRYDG DPLSLADATI YLPTRRAARE
LRSVFVDRLG GVSAILPVIR PLGEFEAELA DLSDEGGAAQ LDHAPPIPKL DRILLLGSLA
QAWKARVPAH VAARFEEGVI VPASLSDGLW LARDLAALMD EIETEEGDWS RLAELVPEEL
AGWWQVMLEF LNIVTRAWPE LLAERDRSNP ATHRNAMLAA EAARLMRTPP RGPVIAAGST
GSIPATARLL GTIARLENGA VVLPGLDLNL DEDSWRAVGA IEGPSACGHP QFGLRKLIGT
IGVARAQVLE LAAPAPELAA RRQLLSEAMR PADTTDLWAL NRSMVDRALS QGALAGVSLI
EAANERDEAA AIAVALRHAI AREGTTAALV TPNRTLARRV AAELKRFGIR ADDSGGSLLA
DSVPATLLRL MLEAICRPKE PVVIVGLLKH PLLRLGLPRE RVRRAAEVIE LMALRGGTGR
PDVATLSSLF AQRHDAMMRD PRKPFWLSRL SASDIAEARQ VLAALEQAIV PLSSLREAAA
VGLSLLARAS VEAFEALARD EDGTLNELYR GEAGEALARF LRDLVECRTG TKAEISEWPD
VFAALMAGEV VKPAMGADQR IAIWGALEAR LQSVDMLVLG GLNEGTWPEA PRSDRFMSRL
MKGELKLEPP ERRIGLAAHD FMMAFGAPQV VLARSTRSES APAVASRWLQ RLAACAGPSE
TAAMRARGQR FIAWAHALEA RDDVPFAPRP CPRPPLEARP KRFSVTEIET LRRDPYAVYA
RRILKLMPLD PLIRDPGAAE RGTLFHDILQ AFIQSGADPS APDALERLLD AGKKLFAETK
LPVDVEAVWW PRFERTAYGI IGWERGRAEA VAARHAEIRA SAIEVGATGK LLSGRADRID
IRADGSAEII DYKTGSTPSK VQAHRLLAPQ LALEAALLAR GAFVELGQAQ PAELCYVRLK
ANGTVEPESI LKIKDSEKAG PEIAEEAWQR LERLLAWYDN SEAGYLSRAL PFKEGDTEGD
YDHLARVLEW SAGGDSGEGE AE
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