Gene Meso_3579 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3579 
Symbol 
ID4181408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3853660 
End bp3854418 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content64% 
IMG OID638069472 
Productnucleotidyl transferase 
Protein accessionYP_676113 
Protein GI110635905 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00479956 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAAGC CGGAACGGGC CATGGTTCTT GCGGCGGGCC TTGGCCAGCG GATGAGACCT 
CTCACCGAGA CAATGCCGAA GCCCCTCGTT CCCGTGGGCG GCAAGCCGCT CATCGACTGG
GGCCTCGACG CGCTGCAAAG GGCGGGCGTG GGCGAGGCGG TCGTCAACAT ACATTATCTC
GCCGCCCTGA TGGTGGAGTA CCTGGCCCTG CGCGCCGACC CGCACATCGT CATCTCCGAC
GAGCGGCAGA TGCTGCTCGA TTCCGGCGGC GGCATCGTCA AGGCCTTGCC ACTTCTTGGG
GACAACCCCT TCTTCCTCCT CAATGCCGAC ACATTCTGGA TCGACCGCTC GGAAGATAAC
CTGGACCGGC TGGCCTTTGC GTGGAACGGC GGTCAAATGG ATATTCTGAT CCTGCTCGCG
GATCCTGTAT CCGCGACGGG GCATACGGGG AAGCTGGATT TCACGATGGA TGCGGAGGGG
CGGCTCAAGC GTGCGCAGGG CGCGGCAAAC GGCTATATCT ATGCCGGCGG CGCTATCCTG
CATCCGCGCC TCTTTGCCGG CGCCGTCGCG ACCCCTCATT CCCTCAACCT GTATTTCGAC
CGTGCGATTG CGGCAGGCAG GATGTATGGC CTGCCGCTCG ACGGCCACTG GATCACCGTC
GGTACGCCGG GCGCGATTGC CCCGGCCGAA GCCGTGCTGC GGCGGCTCTC GGTATCGGTC
CAAAGATCGG AATCGATTTT TGGAAAGCAC GATGCGTAG
 
Protein sequence
MRKPERAMVL AAGLGQRMRP LTETMPKPLV PVGGKPLIDW GLDALQRAGV GEAVVNIHYL 
AALMVEYLAL RADPHIVISD ERQMLLDSGG GIVKALPLLG DNPFFLLNAD TFWIDRSEDN
LDRLAFAWNG GQMDILILLA DPVSATGHTG KLDFTMDAEG RLKRAQGAAN GYIYAGGAIL
HPRLFAGAVA TPHSLNLYFD RAIAAGRMYG LPLDGHWITV GTPGAIAPAE AVLRRLSVSV
QRSESIFGKH DA