Gene Meso_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3560 
Symbol 
ID4181808 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3834291 
End bp3835415 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content63% 
IMG OID638069454 
ProductROK domain-containing protein 
Protein accessionYP_676095 
Protein GI110635887 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA GTGCGAAGGC TGTCCTTCGA CGTCTCGCCT ATGAGGGGCC TTCCACACGT 
CCTCAGATCG GTGCTGCGCT TGGCCTTTCG CGTCCAACGA TGTCGGCCGC GGTCGCGGAA
CTGGAAAGGC TCGGCTATGT GGATCTGACG GGCGCGGTGC AGGGGACGCT TGGTCGTAGC
GCTGCGCAGT ACCGGGTCGG CCGCAAGGCT GGGCACGTAA TTGCGGTAGA TGCTGGCTCA
ACCCACGTGC GCCTGCGGGT CGCAACGCTG GACGGAAGGC TGCTGCAAAG CAGGGTTTGC
AGCCTCTCAG GCAGCCAGTT CGCGCTCACT CCCGAGATCA GCCGGACAGT TGCACAGGAA
GTGGCCGCGG CGATCGCGGA GAATGATCGA GACTGGGGAC CTCTACGCGC CCTCGGTATC
GCTATACCGA CCCGAGTGGT TGGTGCGGAA GGCGACGCGA TCAGCACGAA CCAGAACATG
ATCTTCAGCG AATTCGAACC ACCCGCTGGG ATTGATGTGC TGTTGGTCAA CAACGTTAAT
TGCGCAGCCG TGGCCGAACG TCAATTCGGA GCAGCACGAG GTCGTGATAC CTTTGCCTAC
GTCCAGATAG GCCTCAAGAT CGGTATGGGG CTGGTGCTTG GCGGAAAACT AATTGCCGGC
GCGACCGGAT CTGCCGGCGA AATCGGACAT GTGAGCTTCC CCTTCGGCCC GGGCCTCTTT
CCCGAGGCGG GTGCCGTGGA ACGCTATCTC GGTACGGAAT CGCTGATCGC GCGCGTCCGT
GCCCATTGGC CCCGAGCCTG CGGGGAGCCG CCCGCAACCA CGAACGAATT ATTGGCCCTC
GCGGAACAGG GAAATACGGC CGCAATTGAA CACGTGGAGC AACACGCTGC TGATATTGGC
GCCCTGGTGG CGACCTGCGT GAGCGTGGTC GATCCCGGGT TGGTGGTCTT GGGCGGCGGC
ATGGGCGCCT CGCCGCTGCT GCTTCCCAAA GTGCAGGAGG TGGTGGGTCG CTTGACATAT
CCCGTCGAGG TCGCAACCAC CTTGCTAGGT GTCGATGCAA CCGTGCTCGG CATCGAGAAG
CTCGCGACCG AACAAGCACT CTCGCGCCTG CTCGGCCAAA TCTAG
 
Protein sequence
MTESAKAVLR RLAYEGPSTR PQIGAALGLS RPTMSAAVAE LERLGYVDLT GAVQGTLGRS 
AAQYRVGRKA GHVIAVDAGS THVRLRVATL DGRLLQSRVC SLSGSQFALT PEISRTVAQE
VAAAIAENDR DWGPLRALGI AIPTRVVGAE GDAISTNQNM IFSEFEPPAG IDVLLVNNVN
CAAVAERQFG AARGRDTFAY VQIGLKIGMG LVLGGKLIAG ATGSAGEIGH VSFPFGPGLF
PEAGAVERYL GTESLIARVR AHWPRACGEP PATTNELLAL AEQGNTAAIE HVEQHAADIG
ALVATCVSVV DPGLVVLGGG MGASPLLLPK VQEVVGRLTY PVEVATTLLG VDATVLGIEK
LATEQALSRL LGQI