Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3559 |
Symbol | |
ID | 4181807 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3832886 |
End bp | 3834151 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638069453 |
Product | extracellular solute-binding protein |
Protein accession | YP_676094 |
Protein GI | 110635886 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.725882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCATGT GCAGCAAATT TCTGGGTAGC GTCTCGGCAC TGATCGCGGT CGGCTGGACC GGGATAGCGG CAGCTCAGGA CGTCACGCTG GAATACTGGG TTTATTCAGA TTTCGCGCAG GGAGACGCGC TGGCGCTTCA GCAGCAATTC ATCAGCGAGT TCACCGCCAA GCATCCCGGT GTAAAGATCA ACATCGTCGG CAAAGGCGAC GCGGACCTTA CGGCGGGGCA GATCGCCGGC GCGGCGAGCG GCAACATTCC GGACGTCTTC ATGAATGGCA TCGGCACCGG CGCCCAACTG GTCGAAGTAG GCGCGCTGGC CAACATCCAT GACAAGTGGA TGGCCATGCC GGAGGAATAC CGCAGCCAGT TCGACGAAAG CGCAATTAAG AATTGCACGC CTGAGCCAGG CAAGATGTAC TGCCTGCCCT ATACCGGCTA CGGCTCACTC CTCTTTCGCA ACCTGACCGT TCTCGAGAAG GCGGGCATCG ATCCGTCAGT GCCGCCGGCA ACCTGGGCGG AATGGCTGGA CCAGATGAAG AAGGTCAAAG AAGCGGGGAT GTACGCCATT CCCGACCAGG CGCTTATCTT CAACTCCATC GCCGAGATGT ACGCGATCTC GGGCGACGTC AGCACCTGGG GTATCGACTG GGAAACCCGC ACCACACGAA TCGATCCGGA CGTTATGGCC GAGGTTCTCC AAAAATTCGT GGACATGGCG CCGCTTACCT CCGGAACGAG CCGCAACGAC CAGGCCACAA AGGACCTGTT CATCACCGAC AATCTCGCCT TCCACACCGT GGGACCGTGG GTCAACCCGA CCTATGAGGA AGCCAGCAAG AACGGTAAGC TGAAGTATGA CTTCGTCCTC ATCCCCGGCG ATACGCCCGA TAAGCACGGC GGCATACAGA ATTACGAGAT AATCGGCGTG GCTCCAGGCG AGAACTTCGA CATCGCCTGG GAGTTCGCTT CCTACGTGAC CGAGAAGGAA CAGATGGCGC GCTGGGCGAA GCTCCTGTCT CGCTTCAACT CGAATGTCGC GGCCATGAAC GATCCGGAAG TGTCGGCGCT ACCACTGATC TCCAAGTCGG TGGAGGCCGT TAAATACGCC ATGGACGTAA TGCCTCCCTA TCTCGTGAAG GCCGCTCCGA GCTGCTACTC CTCAACGGTC GTCGATTACG TTTCCGCCAC AGCTGACGGA GACTATACGC CCGAGGAAGG CGCAAAGGAG ATGATCGCGG AACTGAACGA CTGCTTGGCC GAATAA
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Protein sequence | MAMCSKFLGS VSALIAVGWT GIAAAQDVTL EYWVYSDFAQ GDALALQQQF ISEFTAKHPG VKINIVGKGD ADLTAGQIAG AASGNIPDVF MNGIGTGAQL VEVGALANIH DKWMAMPEEY RSQFDESAIK NCTPEPGKMY CLPYTGYGSL LFRNLTVLEK AGIDPSVPPA TWAEWLDQMK KVKEAGMYAI PDQALIFNSI AEMYAISGDV STWGIDWETR TTRIDPDVMA EVLQKFVDMA PLTSGTSRND QATKDLFITD NLAFHTVGPW VNPTYEEASK NGKLKYDFVL IPGDTPDKHG GIQNYEIIGV APGENFDIAW EFASYVTEKE QMARWAKLLS RFNSNVAAMN DPEVSALPLI SKSVEAVKYA MDVMPPYLVK AAPSCYSSTV VDYVSATADG DYTPEEGAKE MIAELNDCLA E
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