Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3556 |
Symbol | |
ID | 4181804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3829971 |
End bp | 3831083 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638069450 |
Product | ABC transporter related |
Protein accession | YP_676091 |
Protein GI | 110635883 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0802709 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTTTCC TGGAAATTTC CTCTGTCACG AAATCCTTCG GGTCAGTGAA CGTGCTGAAG GACGTGAGCC TTTCGATCGA AGAGGGCGAG TTCGTCGTCT TCGTGGGACC TTCGGGCTGC GGAAAATCGA CGCTTCTCAG AATGATCACT GGTCTCGAGG ATCCGACCTC CGGCACGATT TCCATCGGCG GCGAGGTGGT CAATGACGTC GAGCCCGCCA AGCGCGGCAC CGCGATGGTG TTCCAGTCCT ATGCGCTTTA CCCGCACATG ACCGTGTTCC AGAACATGTC CTTCGGCCTG CGTATGGCGG GAAGCCCGAA GGCGCTCATC CATGAACGGG TGGAGAAGGC GGCGGCAATC CTGCGCCTTG AGCAGCTGCT CGACCGCAAG CCGGCCCAGC TATCTGGAGG GCAGAAGCAG CGGGTGGCAA TCGGCCGGGC GATAGTGCGG GAACCGCGCG TATTCCTCTT CGATGAGCCG CTTTCCAACC TGGATGCCGA ATTGCGTGTC CAGATGCGCG CCGAGCTGAT GGAGCTGCAC CGGCGCCTGG GCACCACGAT GATCTATGTG ACGCATGATC AGGTGGAGGC CATGACCCTC GCCGATAAGA TGGTAGTCAT GCATGCCGGG CGCATCCAGC AAGCCGGCGC TCCTCTCGAC CTCTACGACA ATCCGGATAA CCGCTTCGTC GCCGGCTTTG TCGGTTCGCC CAAGATGAAC TTCCTGCCTG CGCGGATCGC GGGTTCCGAC GGACAGGTCC TGAAGCTCGG AGGCATTGGA GGTCAGGGCG CCGCGAGCAT CCAGGCCACG CTGCCGCGCG ATGTCGAGAA CGTAGAGATC GGACTGCGCC CCGAACATTT GCGCATGGTG TCCGGAACGA CGCCCGCCAA TGGCGCGCTG CGGCTGGAAG GCCGCGTCGT TTTCTGCGAG GAGCTCGGGG CGGAATCCTA CGTCCACCTG GATCTGGCGG ACGGCACCAG GGTCATCGCG CGCGCTGGCC GCGATGCGGC AAAGATGACC GATACCGCGG TCCTGACGGG AGATCTCGAT CGGGCGCTTC TTTTCTCTCC CGACGGCGCG CGGATGCGCG GTGCGACCGG AACCAGCGCA TGA
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Protein sequence | MAFLEISSVT KSFGSVNVLK DVSLSIEEGE FVVFVGPSGC GKSTLLRMIT GLEDPTSGTI SIGGEVVNDV EPAKRGTAMV FQSYALYPHM TVFQNMSFGL RMAGSPKALI HERVEKAAAI LRLEQLLDRK PAQLSGGQKQ RVAIGRAIVR EPRVFLFDEP LSNLDAELRV QMRAELMELH RRLGTTMIYV THDQVEAMTL ADKMVVMHAG RIQQAGAPLD LYDNPDNRFV AGFVGSPKMN FLPARIAGSD GQVLKLGGIG GQGAASIQAT LPRDVENVEI GLRPEHLRMV SGTTPANGAL RLEGRVVFCE ELGAESYVHL DLADGTRVIA RAGRDAAKMT DTAVLTGDLD RALLFSPDGA RMRGATGTSA
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