Gene Meso_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3538 
Symbol 
ID4183061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3812299 
End bp3813231 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content62% 
IMG OID638069433 
ProductHpcH/HpaI aldolase 
Protein accessionYP_676074 
Protein GI110635866 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2301] Citrate lyase beta subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0507749 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCTTGG ACCGGATTTC GACACTGCGC AGCATCCTGT TCGTGCCGGG CGCACGACGG 
GACCTGTTTG CCAAGGCGGA AGCTACCGGA GCGGACGCCC TCGTCCTGGA CCTTGAAGAT
TCGGTCTCCA CAGACATGAA GGGGGAGGCC CGGCAACACG TCGCCGACGC GTTGGCGAGG
TCCGCGCATC GGCTGACATT CGTTCGCATC AACCACCCGT CCTCAGGACT TGTCGATGAG
GATATTTCGG TGCTGGCGCC CCATCCGTCA CAAGCGCTAA TGGTGCCCAA GGTGGATGAT
GCCAAGGATC TGCTCGATGT GGATCGCGCG TTGACCAAGT TTGAACAGCG CGCAGGGCTC
GCAAGCGGTG CGATTGGGAT CATGATCGTG GTCGAGACGT GTCTCGGACT GCGCAACATG
TTCGAAATTC TGCAGAATAT GCCTCGGGTT CGCGGCGCTG GACTTGCCAG CGCGGAGGAG
GGCGACCTGA TGATGGACAT CGGCGGCTAT TGGACGGCGG CGGGAGATGC GCTTGCCTAT
GCGCGCGGCA AGTTCGTATG TGACGCCCGC GCGGCGAAAG CGGAATGGCT GGTCGATGGA
GCCTTCATGA ATCTGGGGAG CGACGATGCC CTGGAGGCAG AGGTGAGCCG CGCCCGCATG
TTAGGCTTCA CCGGGAAGAT TGCTATCCAT CCGCGCCAGG TCCCCGTGAT CAATCGCGCC
TTCATGCCAA GCACTGACGA AATCGAGAAG GCCCGCCGGT TGTTGGATGC ATACCGCGAA
GCAGAAGCGA GGGGGCAAGG CGCCATCCGC TTCGAAGGCA TGATGGTCGA TCTTGCGAAC
GCAAAGCGAG CCGAGCGCAT CCTGTCCTTC GCCGCCGCGG CGGGTGTTCC GGCATCACAA
CAACACGATG GCTCCAAAGA CGAGAAGCGT TGA
 
Protein sequence
MTLDRISTLR SILFVPGARR DLFAKAEATG ADALVLDLED SVSTDMKGEA RQHVADALAR 
SAHRLTFVRI NHPSSGLVDE DISVLAPHPS QALMVPKVDD AKDLLDVDRA LTKFEQRAGL
ASGAIGIMIV VETCLGLRNM FEILQNMPRV RGAGLASAEE GDLMMDIGGY WTAAGDALAY
ARGKFVCDAR AAKAEWLVDG AFMNLGSDDA LEAEVSRARM LGFTGKIAIH PRQVPVINRA
FMPSTDEIEK ARRLLDAYRE AEARGQGAIR FEGMMVDLAN AKRAERILSF AAAAGVPASQ
QHDGSKDEKR