| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3507 |
|---|
| Symbol | |
|---|
| ID | 4183206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3777364 |
|---|
| End bp | 3778653 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069402 |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_676043 |
|---|
| Protein GI | 110635835 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGTTC TTGTCACAGG CGCAACGGGG CTTATCGGCA GCACAGTTTG CGCCCGGCTA
ATGTCGGAGG GTCACCACGT GATTGCCGTG GTGCGGCCGG GCAGCAATCC ACTCCCTTCG
GGAGCGGCCC AGATCGTAGA AATCGACATG GCCCGGGCCA CCGGGGTGCA AATCTGGGCG
GAGCATCTTT TCGGTGTAGA AGCGGTCGTC AACTGCGTTG GCGCGCTGCA GGACAGCGCG
CGGGAGGACA CGGAAGGCGT TCATGTCACT GGGGCAGCAG CCCTTTTCCG GGCCTGTGAA
AGGCTGAGCA TAAGACGCGT CATCCATTTT TCCGCAATTG GCGTCGACCG CGCCCAGCCC
TCCGCTTTTT CCGCGACTAA GCTTGAGGGC GACCATTTGT TGATGGAGCG GGATCTGGAC
TGGGTGATTC TCCGACCCTC AGTGGTGCTG GGGAGAAACG TCTTTGGTGC GAGTGCCCTT
ATCCGCGGCC TGTCAGCCCT GCCGTTCGCG CTCTCCCTCG GTCGCACTGC CCCCCTCCAG
GTTGTCCAGC TCGACGATGT GGCCGCCACG GTTGCATTCT TCATACAGCC GACCGCACCC
GTCCAGGTGA CATTGGAGCT GGCCGGGCCG GAACGACTGC CCATGGACGA GGTGGTCGCA
CGATACAGGC AATGGCACGG CTGGCAGCCT GCCCGCCGGT TCAGCTTATC GGACAAGGCG
GCAAGCCTTT TCTACCGCGC AGGCGATCTC ATCAGCTTTC TCGGCTGGCG GCCGCCGGTG
CGCAGCACGG CACGAAAGGA GATCGAGCGC GGCGCCGTCG GCAATCCGGG CCCCTGGCGA
TCGATGACGG GGATCCTGCC CACATCGCTT TCAATGGCAT TGATCCGCGA TCCTGTAACA
GTGCAGGATC GCTGGTTTGC GCAGCTCTAC TTCTTGAAAC CAGTTATTTT CATAGTGCTG
CCGCTGTTTT GGATAGGCAC CGGCATCGTC TCCCTGACGA TCGGCTATCG CGAAGGCATC
GAATTGATGC TGCGTACCGG CGCGGGGCCG CTTTCAGCCT CCGGTGTGGT GGCGGGAGCA
ATCGCGGATA TCCTGGTTGG GCTCGCCATC GCTTACCGGC CAACCACCCG CCACGGCCTA
TATGGGGCGA TCGCTTTGTC GGTTTTCTAT ATAATCTCCG GGACGATTCT CCTGCCGTCG
CTATGGGCCG AGCCGCTGGG TCCCTTGGCA AAGATATGGC CGATCCTTGT ACTCCATTTC
GTGGCGCTCG CGATTTACAA GGAGCGGTAA
|
|---|
| Protein sequence | MKVLVTGATG LIGSTVCARL MSEGHHVIAV VRPGSNPLPS GAAQIVEIDM ARATGVQIWA
EHLFGVEAVV NCVGALQDSA REDTEGVHVT GAAALFRACE RLSIRRVIHF SAIGVDRAQP
SAFSATKLEG DHLLMERDLD WVILRPSVVL GRNVFGASAL IRGLSALPFA LSLGRTAPLQ
VVQLDDVAAT VAFFIQPTAP VQVTLELAGP ERLPMDEVVA RYRQWHGWQP ARRFSLSDKA
ASLFYRAGDL ISFLGWRPPV RSTARKEIER GAVGNPGPWR SMTGILPTSL SMALIRDPVT
VQDRWFAQLY FLKPVIFIVL PLFWIGTGIV SLTIGYREGI ELMLRTGAGP LSASGVVAGA
IADILVGLAI AYRPTTRHGL YGAIALSVFY IISGTILLPS LWAEPLGPLA KIWPILVLHF
VALAIYKER
|
|---|
| |