Gene Meso_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3500 
Symbol 
ID4182160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3771385 
End bp3771999 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content60% 
IMG OID638069395 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_676036 
Protein GI110635828 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID[TIGR00568] DNA alkylation damage repair protein AlkB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCTCCC TCCCTCCCGG AATAAGGCAT ATGCCAGGCC TCCTGTCACC CACCGAACAG 
GCGGCTTTGC TCACCGAAAT CCGCGCGGTG GTGATTGCGG CACCGCTTTA TGTGCCGACC
ATGCCACGCA CGGGAAAGCC CATGAGCGTG CGCATGACGA ATTGCGGCGT GCTCGGCTGG
GTGACCGACA AGGAGAGGGG ATACCGTTAT CAGGAAACGC ATCCCGCCAC GGGAAAGCGA
TGGCCGCTGA TCCCGCAGCG TCTGCTAGAA CTTTGGGATG AAGTGTCCGG TTATCCTCAT
TCGCCGGAGG CATGCCTCAT CAATTTCTAT TCGCAAGACG CCAAGATGGG GCTACACCAG
GATCGCGACG AGAAAAACTT CGCAGCACCC GTAGTCTCCG TCTCATTGGG CGACGATTGC
CTGTTTCGCG TCGGCGGCAA TGATCGCGAA AGCGGCACCG CCTCGTTTCG GCTGTCGAGT
GGGGACGTGG TGGTGCTCGG CGGGGAAGGG CGGCTTGCCT TCCATGGGGT GGACCGGATC
TATCCCCACA CGTCCGATCT TCTGAAAAAT GGCGGGCGCA TCAACCTCAC GCTGCGCCGG
GTGAATCTGC CTTAA
 
Protein sequence
MLSLPPGIRH MPGLLSPTEQ AALLTEIRAV VIAAPLYVPT MPRTGKPMSV RMTNCGVLGW 
VTDKERGYRY QETHPATGKR WPLIPQRLLE LWDEVSGYPH SPEACLINFY SQDAKMGLHQ
DRDEKNFAAP VVSVSLGDDC LFRVGGNDRE SGTASFRLSS GDVVVLGGEG RLAFHGVDRI
YPHTSDLLKN GGRINLTLRR VNLP