Gene Meso_3485 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3485 
Symbol 
ID4179893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3760354 
End bp3761061 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content57% 
IMG OID638069380 
Productimport inner membrane translocase, subunit Tim44 
Protein accessionYP_676021 
Protein GI110635813 
COG category[S] Function unknown 
COG ID[COG4395] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTCT TTGATTTTGG CACGATCTTT TTCTTAGTCG CGGCGGTCGT GATCTTCTTT 
CAATTGCGCA ATGTGCTGGG CCGGCGGACC GGAAGTGAAA GGCCGCCTTT TGACCCCTAT
ACGGCCGGCC GATCCCGTCC CGCGGAAGCA GAGAAGTCGG TCAAGAACGA CACGGTGGTT
GCCTTGCCCA GGCGTAAAGG CCTCGTGGAT GAGGAACGCT ACAATATCAT CGACAAGGTT
GCGCAGCCCG GCACCGAGCT GAACCGTGGC TTGCGAGCGA TAAAGGATGC GGACCCTTCC
TTCGATCCGA ATACCTTTGT GGATGGCGCC AAACTGGCAT ACGAGATGAT CGTTATGGCG
TTTGCCGACG GGGACCGGCG CACGCTCAAA AATCTCCTGT CGCGCGAGGT CTATGAGGGC
TTTGTCTCGG CCATAGACGA ACGTGAAAGG CGATCGGAGA AGATCGAGTC TTCTTTCGTC
GGCATCGACA AGGCCACCAT CATCAGTGCC GAGATGAAGG GCAGTGAAGC CCACGTTACG
CTTCGTATTG TAAGCGAGCT GATCTCTGCC ACACGCGACA GCGGAGGCAG CATTATTGAT
GGCGATCCCG AGACTGTCGC TGAGGTGAAG GATATCTGGA CCTTTGCCCG TGATACGCGC
TCGCGCGATC CCAACTGGAA GCTGGTGGCG ACCGAAGCGG AAGAGTAA
 
Protein sequence
MEFFDFGTIF FLVAAVVIFF QLRNVLGRRT GSERPPFDPY TAGRSRPAEA EKSVKNDTVV 
ALPRRKGLVD EERYNIIDKV AQPGTELNRG LRAIKDADPS FDPNTFVDGA KLAYEMIVMA
FADGDRRTLK NLLSREVYEG FVSAIDERER RSEKIESSFV GIDKATIISA EMKGSEAHVT
LRIVSELISA TRDSGGSIID GDPETVAEVK DIWTFARDTR SRDPNWKLVA TEAEE