Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3480 |
Symbol | aroE |
ID | 4179888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3756790 |
End bp | 3757629 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638069375 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_676016 |
Protein GI | 110635808 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAGT CACTTCACCG TGCCTTTATC TGCGGCCATC CGGTGGCCCA CTCTCGTTCC CCGGTCATTC ACAATTTTTG GCTGAAGCAG CACGGGATAG AGGGGAGTTA TGAGCGTCGC GACATTGCGC CCGAGGCGTT CTCGCTTTTT ATCCGGGAGT TTCCGCGTTT CTATATGGGT GGCAATGTTA CCATCCCGCA TAAGGAGAGC GCCTGGCGCT TGGTGGAGAC CCGCGACGAA GCTGCGGAGA CAATAGGCGC GGTTAACACG CTTTGGCTTC AAGACGGCAG GATTATGGGC GGCAATACCG ATACCTACGG CTTTGCCGCC AACCTCGATA TGGAATTAGC GGGCTGGGAG AAGAATGCGG TGGCAACCGT GCTCGGCGCC GGCGGTGCGG CTCTCGCGGT GGTGCATGCG CTTCAGAGCC GGGGAATTCG CGATATCCGG ATCGTCAATC GCACGGTTTC GCGTGCCCGG GCTGTTGTGG ACCGGTTCAA GGGCGGCACC AGCGCGCATG CATGGGAAGC GGTCCCAGAC CTGCTTTCGG ATACCTCGCT CCTTGTCAAT ACCACTTCGC TCGGGATGCA TGGCGGGCCG GAAGGCCATA TCGATCTTGC GCCGCTCCCG GATTCGGCGA TCGTGACGGA TATTGTCTAT GTGCCCTTGC GCACGCCTCT TCTCGCTTCG GCGGCAGCAA GGGGCCTGCG TACCGTGGAT GGGCTGGGCA TGCTCCTGCA CCAGGCAGTT CCAGGGTTTG AGCGATGGTT CGGTGTGCGG CCCGAGGTCA CGCCTCACCT CCGCGAAATC GTGGTTGCGG ATCTCGAGGC CGGAAAATGA
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Protein sequence | MAESLHRAFI CGHPVAHSRS PVIHNFWLKQ HGIEGSYERR DIAPEAFSLF IREFPRFYMG GNVTIPHKES AWRLVETRDE AAETIGAVNT LWLQDGRIMG GNTDTYGFAA NLDMELAGWE KNAVATVLGA GGAALAVVHA LQSRGIRDIR IVNRTVSRAR AVVDRFKGGT SAHAWEAVPD LLSDTSLLVN TTSLGMHGGP EGHIDLAPLP DSAIVTDIVY VPLRTPLLAS AAARGLRTVD GLGMLLHQAV PGFERWFGVR PEVTPHLREI VVADLEAGK
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