Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3474 |
Symbol | rho |
ID | 4179882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3751923 |
End bp | 3753212 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 638069369 |
Product | transcription termination factor Rho |
Protein accession | YP_676010 |
Protein GI | 110635802 |
COG category | [K] Transcription |
COG ID | [COG1158] Transcription termination factor |
TIGRFAM ID | [TIGR00767] transcription termination factor Rho |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.169204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTACAAG CAGAGTCCGC CCCTATGCAG GAAATGAAAC TCCAAGAGCT GAAGAGCAAA TCGCCGACCG ACCTGATCGC GTTTGCTGAA TCGCTCGAGG TCGAGAACGC CAGCATTATG CGCAAGCAGG AGCTGATGTT TGCGATCCTC AAAAAGCTCT CAATGCAGGA CATAGAGATT GTTGGGGATG GCGTCGTAGA GGTGCTGCAG GATGGCTTTG GCTTTTTGCG TTCAGCCACC GCCAATTACT TGCCGGGCCC GGACGACATT TATATTTCTC CTTCGCAGAT CCGGCGGTTT TCTCTGAAGA CAGGCGATAC GGTAGAGGGT CCCATTCGCA GCCCCAAGGA GGGTGAACGT TATTTCGCCC TGCTTAAGGT GAACACCATC AACTTCGAGG ACCCGGAGAA GATCCGGCAT AAAATCCACT TCGATAACCT TACGCCGCTT TATCCGGATG AGCGGCTGAG GATGGAGATT GAGAATCCGA CTACAAAGGA TCTCTCACCG CGGGTGATCG ACTTGGTGGC TCCCCTTGGA AAAGGACAAC GCGGGCTTAT CGTTGCTCCG CCACGAACCG GTAAGACCGT TCTGCTCCAG AACATCGCCC ACTCAATCAC CACGAACCAC CCGGAATGCT ATCTCATCGT GCTGCTTATC GACGAGCGGC CGGAAGAGGT GACCGACATG CAGAGGTCTG TGAAGGGGGA AGTGATTTCC TCGACCTTTG ACGAACCGGC TGCCCGGCAT GTCCAGGTAG CAGAGATGGT CATTGAAAAA GCAAAGCGCC TCGTGGAGCA TGGGCGTGAC GTTGTGATCC TGCTTGACTC GATCACGCGC CTCGGCCGCG CCTACAATAC GGTGGTGCCC TCCTCCGGAA AGGTGTTGAC CGGCGGTGTG GACGCCAATG CGCTGCAGCG TCCGAAGCGC TTTTTCGGCG CGGCTCGCAA TATTGAGGAG GGTGGCTCGC TTACGATTAT CGCCACCGCG CTCATCGATA CGGGCAGCCG TATGGACGAG GTGATCTTTG AAGAATTCAA GGGTACGGGC AACTCGGAAA TTGTGCTCGA CCGCAAGGTC GCTGATAAGC GCATCTATCC AGCCATGGAC ATCTTGAAAT CCGGCACGCG CAAGGAGGAT CTCCTCGTGC CGCGTCAGGA TTTGCAAAAG ATCTTCGTTT TGCGCAGGAT CCTGGCTCCG ATGGGAACAA CGGATGCCAT CGAGTTCCTC ATCGACAAGC TCAAGCAGAC CAAGGGCAAC GCCGAATTCT TCGATTCCAT GAATACGTAG
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Protein sequence | MLQAESAPMQ EMKLQELKSK SPTDLIAFAE SLEVENASIM RKQELMFAIL KKLSMQDIEI VGDGVVEVLQ DGFGFLRSAT ANYLPGPDDI YISPSQIRRF SLKTGDTVEG PIRSPKEGER YFALLKVNTI NFEDPEKIRH KIHFDNLTPL YPDERLRMEI ENPTTKDLSP RVIDLVAPLG KGQRGLIVAP PRTGKTVLLQ NIAHSITTNH PECYLIVLLI DERPEEVTDM QRSVKGEVIS STFDEPAARH VQVAEMVIEK AKRLVEHGRD VVILLDSITR LGRAYNTVVP SSGKVLTGGV DANALQRPKR FFGAARNIEE GGSLTIIATA LIDTGSRMDE VIFEEFKGTG NSEIVLDRKV ADKRIYPAMD ILKSGTRKED LLVPRQDLQK IFVLRRILAP MGTTDAIEFL IDKLKQTKGN AEFFDSMNT
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