Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3419 |
Symbol | |
ID | 4183117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3694396 |
End bp | 3696102 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638069313 |
Product | heparinase II/III-like |
Protein accession | YP_675955 |
Protein GI | 110635747 |
COG category | [S] Function unknown |
COG ID | [COG5360] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.784393 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACGGCG GCTTCAGTCC GCTCCTGTGG GATCTTGCGG CGCGTCAGGC GTGGAGGCGC CTGCGTTGTA GATTGCGCGC GGGTCCCGCT TATCGTTGGC GTTATACGGG CCGAACACCC GAACGGCTGC TGATCGCGCC TCCGGATCTG CGAATCGCCG ATCCGGAGAT TGCGCGCGAG ATCTATCATG GCCGCTTCCT TTTTGCCGGC CAGCTGGTCG AGACCGGCGG GGAATCCCCT TTCCACATGG ATGTGGCCAA TATCGCGTGG ATGGAGGCCC TGCATGGTTT CCGATGGCTG CGCCATCTTC ATGCGGCCCA GACAGAACTC GCGTCAGCCA ATGCCCGGGC GCTCGTAGCT GACTGGATTG CGTTGTACGG GCGCCGGATT TCCGGAGTAG CCTGGCAGCC CGCAGTTACC GCCCGGCGTG TGATTTCCTG GCTTCAGCAT TCAGCGGTGG TCCTGCAGGG AGCAGACCTT GCCGCCTACC GCCAATATCT CAAGCTGCTG GCCATTCAGG TACGCTACTT GCGATCGATT ACCCCCGAAA TGCCGGACGG GGAGGAGAAG CTCCGCGCGC GCATAGCGCT TGCCTTCGCC GCCCTTTCCC TTCCCACTTC CGTCTCCACA TTGCGGACGG CGACGCGTAA TCTGAGCATC GAGCTCGATC GGCAGATCCT GCCGGATGGG GGTCACATAT CGCGCAATCC GCGGGCGATC ATCGAGCTCC TGGCCGATCT CCTGCCGTTA AGGCAGACCT ACGCTATCCA GGCGGAACCG CCTCCCCAGG CGCTGGTGGG CGCCGTGGAA CGAATGCTGC CAGCTCTGCG CTTCTTCCGC CACCAGGACG GCAGCCTTGC GCGTTTCAAC GGGATGGGGG TCACGATCCA CGACCGCGTG AACGCAATTC TGCGGCATGA CGATACGGTC GGATCTCCGC TCTCCCATGC GCCGTACTCG GGCTATGAGC GTCTTTCCAT GGGCAGCACG ACGGTGATTG CAGATACCGC GGCCCCTCCA CCCGTCGAGC TGTCCAATGC TGCCCATGCG GGCTGCCTTT CCTTTGAGCT CTCCTCCGGA AAACATCAGT TTATCGTCAA CTGCGGCATC GATAGCTTCG GAGTAGAAGC GTTCCGGCCG CTGGCGCGGG CGACGGCGGC CCACTCGACC GCTACGATCG ACGATACCTC CCAGGCCCGC TTTGCGCTTC CCGCACGATG GGACGATTGG GTGGGCACTC CGCTCGTCGG CGGCCCTCGC AAAGTGACCT GCCGGCGCAT CGACACCGAT CGGTCCCTCG GCTTTGTGGC CAGCCACGAC GGTTATGTCT CCCGCTTCGG CGTCATTCAC GAGCGTGAAC TGGCGCTGAT GCATGAGGGA ACAGTGGTTC GCGGAAGTGA TCGCTTTTTC CGGCCCGATG GCGCCGAGTT GGAGCGAAAG GCGGCGGTGG CAGTGCGCTT CCACCTGCAC CCGGATATCG ATCTATATCG GGACGATAAT GGACTCCTGA TCCTTGCTGG CGATGCCACC GATACCTGGG TGTTCTCCTG CAAGGGGGTT GAGCCTGTGG TGGAGGAGTC CATCTTCTTC GCCGCCATAG CCGGAGCCTG CCGCAGCCGC CAAATCGTGC TGCATTTCAA GGCGAACGAG ATGCAGGAAG TGCATTGGCA GCTCGTGCGC ACGAACAGCA TTCTCTCGCG GAATTGA
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Protein sequence | MDGGFSPLLW DLAARQAWRR LRCRLRAGPA YRWRYTGRTP ERLLIAPPDL RIADPEIARE IYHGRFLFAG QLVETGGESP FHMDVANIAW MEALHGFRWL RHLHAAQTEL ASANARALVA DWIALYGRRI SGVAWQPAVT ARRVISWLQH SAVVLQGADL AAYRQYLKLL AIQVRYLRSI TPEMPDGEEK LRARIALAFA ALSLPTSVST LRTATRNLSI ELDRQILPDG GHISRNPRAI IELLADLLPL RQTYAIQAEP PPQALVGAVE RMLPALRFFR HQDGSLARFN GMGVTIHDRV NAILRHDDTV GSPLSHAPYS GYERLSMGST TVIADTAAPP PVELSNAAHA GCLSFELSSG KHQFIVNCGI DSFGVEAFRP LARATAAHST ATIDDTSQAR FALPARWDDW VGTPLVGGPR KVTCRRIDTD RSLGFVASHD GYVSRFGVIH ERELALMHEG TVVRGSDRFF RPDGAELERK AAVAVRFHLH PDIDLYRDDN GLLILAGDAT DTWVFSCKGV EPVVEESIFF AAIAGACRSR QIVLHFKANE MQEVHWQLVR TNSILSRN
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