Gene Meso_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3419 
Symbol 
ID4183117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3694396 
End bp3696102 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content63% 
IMG OID638069313 
Productheparinase II/III-like 
Protein accessionYP_675955 
Protein GI110635747 
COG category[S] Function unknown 
COG ID[COG5360] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.784393 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGGCG GCTTCAGTCC GCTCCTGTGG GATCTTGCGG CGCGTCAGGC GTGGAGGCGC 
CTGCGTTGTA GATTGCGCGC GGGTCCCGCT TATCGTTGGC GTTATACGGG CCGAACACCC
GAACGGCTGC TGATCGCGCC TCCGGATCTG CGAATCGCCG ATCCGGAGAT TGCGCGCGAG
ATCTATCATG GCCGCTTCCT TTTTGCCGGC CAGCTGGTCG AGACCGGCGG GGAATCCCCT
TTCCACATGG ATGTGGCCAA TATCGCGTGG ATGGAGGCCC TGCATGGTTT CCGATGGCTG
CGCCATCTTC ATGCGGCCCA GACAGAACTC GCGTCAGCCA ATGCCCGGGC GCTCGTAGCT
GACTGGATTG CGTTGTACGG GCGCCGGATT TCCGGAGTAG CCTGGCAGCC CGCAGTTACC
GCCCGGCGTG TGATTTCCTG GCTTCAGCAT TCAGCGGTGG TCCTGCAGGG AGCAGACCTT
GCCGCCTACC GCCAATATCT CAAGCTGCTG GCCATTCAGG TACGCTACTT GCGATCGATT
ACCCCCGAAA TGCCGGACGG GGAGGAGAAG CTCCGCGCGC GCATAGCGCT TGCCTTCGCC
GCCCTTTCCC TTCCCACTTC CGTCTCCACA TTGCGGACGG CGACGCGTAA TCTGAGCATC
GAGCTCGATC GGCAGATCCT GCCGGATGGG GGTCACATAT CGCGCAATCC GCGGGCGATC
ATCGAGCTCC TGGCCGATCT CCTGCCGTTA AGGCAGACCT ACGCTATCCA GGCGGAACCG
CCTCCCCAGG CGCTGGTGGG CGCCGTGGAA CGAATGCTGC CAGCTCTGCG CTTCTTCCGC
CACCAGGACG GCAGCCTTGC GCGTTTCAAC GGGATGGGGG TCACGATCCA CGACCGCGTG
AACGCAATTC TGCGGCATGA CGATACGGTC GGATCTCCGC TCTCCCATGC GCCGTACTCG
GGCTATGAGC GTCTTTCCAT GGGCAGCACG ACGGTGATTG CAGATACCGC GGCCCCTCCA
CCCGTCGAGC TGTCCAATGC TGCCCATGCG GGCTGCCTTT CCTTTGAGCT CTCCTCCGGA
AAACATCAGT TTATCGTCAA CTGCGGCATC GATAGCTTCG GAGTAGAAGC GTTCCGGCCG
CTGGCGCGGG CGACGGCGGC CCACTCGACC GCTACGATCG ACGATACCTC CCAGGCCCGC
TTTGCGCTTC CCGCACGATG GGACGATTGG GTGGGCACTC CGCTCGTCGG CGGCCCTCGC
AAAGTGACCT GCCGGCGCAT CGACACCGAT CGGTCCCTCG GCTTTGTGGC CAGCCACGAC
GGTTATGTCT CCCGCTTCGG CGTCATTCAC GAGCGTGAAC TGGCGCTGAT GCATGAGGGA
ACAGTGGTTC GCGGAAGTGA TCGCTTTTTC CGGCCCGATG GCGCCGAGTT GGAGCGAAAG
GCGGCGGTGG CAGTGCGCTT CCACCTGCAC CCGGATATCG ATCTATATCG GGACGATAAT
GGACTCCTGA TCCTTGCTGG CGATGCCACC GATACCTGGG TGTTCTCCTG CAAGGGGGTT
GAGCCTGTGG TGGAGGAGTC CATCTTCTTC GCCGCCATAG CCGGAGCCTG CCGCAGCCGC
CAAATCGTGC TGCATTTCAA GGCGAACGAG ATGCAGGAAG TGCATTGGCA GCTCGTGCGC
ACGAACAGCA TTCTCTCGCG GAATTGA
 
Protein sequence
MDGGFSPLLW DLAARQAWRR LRCRLRAGPA YRWRYTGRTP ERLLIAPPDL RIADPEIARE 
IYHGRFLFAG QLVETGGESP FHMDVANIAW MEALHGFRWL RHLHAAQTEL ASANARALVA
DWIALYGRRI SGVAWQPAVT ARRVISWLQH SAVVLQGADL AAYRQYLKLL AIQVRYLRSI
TPEMPDGEEK LRARIALAFA ALSLPTSVST LRTATRNLSI ELDRQILPDG GHISRNPRAI
IELLADLLPL RQTYAIQAEP PPQALVGAVE RMLPALRFFR HQDGSLARFN GMGVTIHDRV
NAILRHDDTV GSPLSHAPYS GYERLSMGST TVIADTAAPP PVELSNAAHA GCLSFELSSG
KHQFIVNCGI DSFGVEAFRP LARATAAHST ATIDDTSQAR FALPARWDDW VGTPLVGGPR
KVTCRRIDTD RSLGFVASHD GYVSRFGVIH ERELALMHEG TVVRGSDRFF RPDGAELERK
AAVAVRFHLH PDIDLYRDDN GLLILAGDAT DTWVFSCKGV EPVVEESIFF AAIAGACRSR
QIVLHFKANE MQEVHWQLVR TNSILSRN