Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3379 |
Symbol | |
ID | 4183155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3653945 |
End bp | 3654517 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069273 |
Product | CarD family transcriptional regulator |
Protein accession | YP_675915 |
Protein GI | 110635707 |
COG category | [K] Transcription |
COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000818177 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACCC AGCAAAAAAA GTCGGCACAA AGGCAGGGTT TCAAGACGGG CGAATTCATC GTGTATCCGG CGCATGGCGT CGGGCAGATC GTCGCGATCG AGGACCAGGA AGTAGCCGGG CACAAGCTGG AGCTGTTCGT TATCGATTTC CAGAAAGACA AGATGCGCCT GAAGGTGCCG GTGGGCAAAG CCACCGCCAT CGGCATGCGG AAATTGTCGG AGACGGACTA TGTCGATCGG GCGCTGAAGG TGGTACAGGG CCGCGCGCGC GTGAAGCGCA CCATGTGGTC GCGCCGCGCG CAAGAATATG ATGCCAAGAT CAATTCCGGC GACCTGATCT CGATTTCCGA AGTTGTTCGC GATCTTTACC GAGCCGACAA CCAGCCGGAG CAGTCCTACT CCGAGCGTCA ACTCTATGAG GCCGCGCTCG ACCGCATGGC GCGCGAGATC GCCGCGGTCA ACCGTATGTC GGAGACTGAA GCGGTCCGCC TGATCGAGAC GAATCTGGCC AAAGGCCCTC GCCGGGGCAC CAAGGCAGAG AACGACGATG CGGAAAAGGA AGAGGCTGCA TAA
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Protein sequence | MATQQKKSAQ RQGFKTGEFI VYPAHGVGQI VAIEDQEVAG HKLELFVIDF QKDKMRLKVP VGKATAIGMR KLSETDYVDR ALKVVQGRAR VKRTMWSRRA QEYDAKINSG DLISISEVVR DLYRADNQPE QSYSERQLYE AALDRMAREI AAVNRMSETE AVRLIETNLA KGPRRGTKAE NDDAEKEEAA
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