| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3369 |
|---|
| Symbol | |
|---|
| ID | 4181931 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3638415 |
|---|
| End bp | 3639881 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069262 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_675905 |
|---|
| Protein GI | 110635697 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC GCCATAAGAC CGCAGGATCC GCCTCGGTCG TTCACCGAAC GGCGAGTGTT
CTGATCACCT TTTTTCTGGT CCTAAGCGGC GGCTTCGTCG CTTCGAGCCC TAAGGCGCAG
GAAACAGGCG GCACAGCCAT TGTGCTGAGG CTGGAGGGCG CCGTTAGTCC TGCTACGGCC
GATTATGTGA CCAATGGCCT GGAAATCGCC GCGGAACGCG AGGCACGCCT TGTGGTGCTG
CTGATAGACA CTCCCGGAGG TCTTGATACC TCTATGCGCG AAATCATTCG CGCTATTCTG
GCGTCTTCCG TCCCCGTTGC CAGTTTCGTA GCGCCAAGCG GCGCGCGCGC CGCCAGCGCC
GGCGCCTATA TCCTCTATGC CAGTCATGTG GCCGCGATGG CGCCAGGGAC AAATGTCGGG
GCCGCGACAC CAATCGCGCT GGGAGGGGGA TCGCCGTTCG GAGCAAACCC GGAAGAGGAA
CAGGAAGCGC AGGATTCAGC GGAGGAAGGC GGCGAGGATC GCGGCGGCCG ACGCCAGTCA
CCGCGCAATG CCTCGGAGGA GAAGGCCATC AACGATGCGG TCGCTTACAT ACGTGGTCTC
GCCGAACTGC GCGGCCGTAA TGCCGAATGG GCGGAAAGGG CAGTGCGCGA GGCTGCCAGT
CTGTCATCGG CCGCAGCGGC GCAGCAGGAT GTCATCGACT TCACCGCCTC CTCCATCGAT
GATCTTATGA GAAAGGCAGA CGGTCTCACC GTCCAGGTGG GCCAGTCACA GACCGTGCTG
GAGACCTCGG GGCTGGTCCG AGAGGCGATA GACCCGGACT GGCGCACGCG CTTGCTTTCA
GTCATCACGG ACCCGAATGT CGCACTCATC CTCATGATGA TTGGCATTTA TGGGCTGATC
TTTGAATTCC TCAATCCGGG CACTTTCATA CCGGGCACGA TCGGCGGCAT CAGCCTTTTG
CTCGGCCTTT ATGCCCTCGC GGTTCTGCCG GTAAGCTATG CCGGCGTCGG CCTCATAATC
CTGGGGGCGG CGCTCGTGCT GGCTGAGGCC TTCGCTCCCT CGTTTGGCAT TTTGGGCATC
GGCGGGGCCG TTGCTTTTGT ACTTGGGGCG ACCATCCTTT TCGATACCGA AATCCCGGGA
CTGGAAATCT ATTGGCCCGT GCTCGGCGGC ATTGCTATTG CCAGCCTCGC TTTCAGCCTC
CTCGTGGCGC GTCTTGCCAT GGTTGCGCAT CGCCGCACGG TGGCAACCGG CGCGGAGCAG
ATGATCGGCG CAAGAGGCAA GGTGGACAGT TGGTCGAATG GCAGCGGCTA TGTCCTCGTT
CATGGCGAAC GGTGGAAGGC TGTTTCGGCT GCCTCGCTTG CAGCAGGCAC GGAGATACGC
GTTACCGGCC GCGACGGCCT TGTGCTGAAA GTAGCCGCTC TCGAACCGGA ACATAGCGCT
TCCGAAGAAG GCAGGAGAAA ACCATGA
|
|---|
| Protein sequence | MEDRHKTAGS ASVVHRTASV LITFFLVLSG GFVASSPKAQ ETGGTAIVLR LEGAVSPATA
DYVTNGLEIA AEREARLVVL LIDTPGGLDT SMREIIRAIL ASSVPVASFV APSGARAASA
GAYILYASHV AAMAPGTNVG AATPIALGGG SPFGANPEEE QEAQDSAEEG GEDRGGRRQS
PRNASEEKAI NDAVAYIRGL AELRGRNAEW AERAVREAAS LSSAAAAQQD VIDFTASSID
DLMRKADGLT VQVGQSQTVL ETSGLVREAI DPDWRTRLLS VITDPNVALI LMMIGIYGLI
FEFLNPGTFI PGTIGGISLL LGLYALAVLP VSYAGVGLII LGAALVLAEA FAPSFGILGI
GGAVAFVLGA TILFDTEIPG LEIYWPVLGG IAIASLAFSL LVARLAMVAH RRTVATGAEQ
MIGARGKVDS WSNGSGYVLV HGERWKAVSA ASLAAGTEIR VTGRDGLVLK VAALEPEHSA
SEEGRRKP
|
|---|
| |