| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3368 |
|---|
| Symbol | |
|---|
| ID | 4181930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3637639 |
|---|
| End bp | 3638418 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 638069261 |
|---|
| Product | SPFH domain-containing protein/band 7 family protein |
|---|
| Protein accession | YP_675904 |
|---|
| Protein GI | 110635696 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATGC TTGGCAATAT CGGATTATAT ATTGTTCCGC TCGTCATCTT GCTGATCCTG
CTCGCATCGG CGGTCAAGAT CCTGCGCGAA TACGAACGTG GGGTCGTCTT TACGCTTGGC
CGGTTCACCG GCGTCAAAGG ACCCGGCCTC ATCCTGCTCG TCCCTCTCGT CCAGCAGATG
GTGAGGGTGG ATCTGCGCAC GCTGGTTCTC GACGTGCCGA GCCAGGACGT CATTTCGCGC
GACAACGTAT CAGTCCGGGT CAACGCCGTG ATTTATTTCC GGGTCATCGA CCCTGAAAAA
GCGACGATCC AGGTGGAAGA CTTTATGATG GCCACCAGCC AGCTCGCGCA GACGACGCTG
CGCTCCGTCC TAGGCAAACA TGATCTCGAC GAAATGCTGG CTGAGCGCGA CAAGCTCAAC
AAGGACATAC AGGAGATACT CGATTTTCAG ACCGACGCCT GGGGCATCAA GGTGGCGAAT
GTCGAGATCA AGCATGTCGA CATCAATGAA TCCATGGTCC GCGCCATCGC CAGACAGGCC
GAGGCCGAGC GGGAACGGCG CGCGAAGGTC ATCAATGCGG AAGGAGAACA GCAAGCGGCA
CAAAAACTGC TCGAAGCGGC GGAGATCCTG TCGCGGCAGC CCGAAGCAAT GCAGCTTCGC
TATCTCAGCA CGCTCAATGT CATAGCCGGA GAGAAGAATT CGACGATCGT TTTCCCGTTT
CCGATGGAAA TTTCCGCTCT GGCAAAGGCC TTCGCCGGGG AAACGACGCG GAACAGCTAG
|
|---|
| Protein sequence | MNMLGNIGLY IVPLVILLIL LASAVKILRE YERGVVFTLG RFTGVKGPGL ILLVPLVQQM
VRVDLRTLVL DVPSQDVISR DNVSVRVNAV IYFRVIDPEK ATIQVEDFMM ATSQLAQTTL
RSVLGKHDLD EMLAERDKLN KDIQEILDFQ TDAWGIKVAN VEIKHVDINE SMVRAIARQA
EAERERRAKV INAEGEQQAA QKLLEAAEIL SRQPEAMQLR YLSTLNVIAG EKNSTIVFPF
PMEISALAKA FAGETTRNS
|
|---|
| |