| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3358 |
|---|
| Symbol | |
|---|
| ID | 4181920 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3630295 |
|---|
| End bp | 3630903 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069251 |
|---|
| Product | cytochrome c biogenesis protein CcmA |
|---|
| Protein accession | YP_675894 |
|---|
| Protein GI | 110635686 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
|---|
| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.502748 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTG CCGCTGAAAA TTTAAGCGGC GAGCGCGGCG GGGAAACCGT CTTTTCTGGT
GTTTCCTTTG CGCTGGGCCA GAGCGAAACG CTCCTGGTCA CCGGCCCCAA CGGAGCCGGC
AAATCCACGC TTTTAAGAAT TATCGCAGGA CTGTTGCCCG TGGCAAAAGG CCATGTGGCG
TTTTCAGGAG GCGGAGAGAT TTTCCCCGAT GCCGGCGCTG CATGTCATTA TCTCGGGCAT
CTCAACGGAA TGAAGCCCGC GCTCAGCATA GAGGAGAACC TTGTCTTCTG GCGCGATTTC
CTCGGCGAGG AGCGGCTTTC GCCCTTGGAG GCATTGGAGA TCGTCGGCCT CGGCGAAATC
GCTCATCTGC CCTTCGGCTA TCTCTCCACC GGCCAGCGGC GGCGTACGGC CATCGCGCGG
CTGCTCGTCT CGTACCGTCC TGTCTGGCTG CTCGACGAGC CTACAGCCGG GCTCGACCGC
GCATCGGAGG CGCAATTCGC GGAAGTGATG CGTGCGCATC TATCGGCAGG CGGAATCATC
GTTGCCGCGA CGCACCTGCC GCTGGGCCTT GAGGGAACGC AGGAGTTGAA GATGGGAGCA
GGGAACTAG
|
|---|
| Protein sequence | MRLAAENLSG ERGGETVFSG VSFALGQSET LLVTGPNGAG KSTLLRIIAG LLPVAKGHVA
FSGGGEIFPD AGAACHYLGH LNGMKPALSI EENLVFWRDF LGEERLSPLE ALEIVGLGEI
AHLPFGYLST GQRRRTAIAR LLVSYRPVWL LDEPTAGLDR ASEAQFAEVM RAHLSAGGII
VAATHLPLGL EGTQELKMGA GN
|
|---|
| |