Gene Meso_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3342 
Symbol 
ID4181719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3614190 
End bp3614867 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content64% 
IMG OID638069235 
Producthypothetical protein 
Protein accessionYP_675878 
Protein GI110635670 
COG category[S] Function unknown 
COG ID[COG4991] Uncharacterized protein with a bacterial SH3 domain homologue 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.799557 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAC TTGCCATGAA AAGCGCAACC GCCGCTGTGG CTCTATTTGC GCTTTCCGGC 
ATCGCCGCGG CGCAGACGAT GGCGACGGCG ACGACCGACC TGAATGTGCG CGCAGGACCT 
GGGCCGAACT ATGCGGTCGT GGGTGTTATC GGCGCATCGC AGCAGACGAC GGTGAACGGC 
TGCATTCAGG GCAGCAAATG GTGCCAGGTC AGCCATAACG GCGTGCAGGG CTGGGCCTAT 
TCGGATTATC TGACCGCAAC CATGGGCGGC GGCCAGACCG TGGTGCTTAC TGAACGGCCG 
GCCGATGCGG TGCCGACGGT CACTTATGAG ACGACGGCCA GCACGGATGG TGCCGGGGCC 
CTGACCGGCG CCACGACAGG TGCCGTTGCG GGTGCCATTA TCGGCGGTCC CGTAGGCGCT 
GCCGTCGGCG GCGCGGCCGG TGCCGTGGCA GGTGGCGCAA TCGACACAGT CACGCCGCCG 
GAGCGGGTGG TGAGCTATGT CCGCCAGAAC GAGGCCCAGC CCGTTTATCT GGAAGGCGAA 
GTCGTGGTCG GCGCCCAGCT CCCGGAAACG GTAGCGGTGC AGGAAATACC GGATTACGAG 
TATCGGTATG TGTATGTGAA CAATCAGCCG GTCCTGGTCG AGCCGCAGAG CCGCCGGATC 
GTCTATGTGA TGCGCTAA
 
Protein sequence
MKLLAMKSAT AAVALFALSG IAAAQTMATA TTDLNVRAGP GPNYAVVGVI GASQQTTVNG 
CIQGSKWCQV SHNGVQGWAY SDYLTATMGG GQTVVLTERP ADAVPTVTYE TTASTDGAGA 
LTGATTGAVA GAIIGGPVGA AVGGAAGAVA GGAIDTVTPP ERVVSYVRQN EAQPVYLEGE 
VVVGAQLPET VAVQEIPDYE YRYVYVNNQP VLVEPQSRRI VYVMR