| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3326 |
|---|
| Symbol | |
|---|
| ID | 4179460 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3594724 |
|---|
| End bp | 3595458 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638069219 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_675862 |
|---|
| Protein GI | 110635654 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.262642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGA ACGCGCAGAC GCTGCTCGAA GTGAGGGGCG TTGAAACCTA TTACGGAAAA
ATTGCTGCCC TCAGGGGCGT CGACCTGAGC GTTGATCGCG GTGAAATCGT CACCATGATC
GGCGCAAACG GCGCCGGGAA ATCGACGCTG ATGATGACCA TCTGCGGCAG CCCGCAGGCA
CGCACCGGCC AGATAATCTA CGATGGTGCG GACATCACGC ATGTGCCAAC CCACGAGATC
ATGCGCCTGG GCATCGCCCA ATCGCCGGAA GGCAGGCGCA TCTTCCCGCG CATGACCGTG
ATGGAAAACC TGCAAATGGG AGCGGCGCTC GTCGACCCCA AATTATTCGA AGACGATCTG
AGGCGCGTCT TTACGCTGTT CCCCCGATTA AAGGAGCGGA TCTCCCAGCG CGGCGGCACT
CTATCGGGAG GTGAGCAGCA GATGCTGGCG ATCGCTCGCG CGCTGATGAG CCGCCCCAAA
CTGCTCCTGC TCGACGAGCC TTCGCTCGGT CTGGCGCCGC TGATCGTCAA GCAGATTTTC
GAGGCGATCC GTGAACTCAA TGAAAATGAG GGACTTACCG TGTTCCTTGT CGAGCAGAAC
GCATTCCATG CTCTGAAGCT CGCGCATCGC GGCTATGTCA TGGTCAACGG TAACGTGACC
ATGAGCGGCA CCGGCGCCGA GCTTCTCAAA CGGGAAGAGG TGCGCGCGGC CTATCTCGAG
GGCGGGAGGC ATTGA
|
|---|
| Protein sequence | MSGNAQTLLE VRGVETYYGK IAALRGVDLS VDRGEIVTMI GANGAGKSTL MMTICGSPQA
RTGQIIYDGA DITHVPTHEI MRLGIAQSPE GRRIFPRMTV MENLQMGAAL VDPKLFEDDL
RRVFTLFPRL KERISQRGGT LSGGEQQMLA IARALMSRPK LLLLDEPSLG LAPLIVKQIF
EAIRELNENE GLTVFLVEQN AFHALKLAHR GYVMVNGNVT MSGTGAELLK REEVRAAYLE
GGRH
|
|---|
| |