| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3318 |
|---|
| Symbol | |
|---|
| ID | 4179452 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3585723 |
|---|
| End bp | 3586604 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638069211 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_675854 |
|---|
| Protein GI | 110635646 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTGGG ACGATGTCCG TGTGTTCCTC GCGGTCGCCC GCGCCGGTCA GATACTCGGC
GCGGCCAGGC GGCTCGGCCT CAACCACGCC ACTGTTTCCC GGCGCGTGGC CGCGCTTGAG
GACGCCGCCG GCGCAAAGCT TTTCCGCAGG CTTACCACAG GAAGCGAATT GACGCCGGCC
GGCGAGCGCC TGCTGGCGGC GGCGGAGCGC ATGGAAGCCG ATATGATTGC CGCCCGCGCC
GAGATCGCAG GCGAGGGCGA GGACATTTCG GGCAGCGTTC GCATCGGCGC GCCGGACGGT
TTTGGCGTAG CCTTCCTCGC GCCGCGGCTG TGGCGGCTGA CAGAACGCCA CCCGCGGCTT
TCAATCCAAC TCGTGCCGGT CCCGCGTTCC CTGTCGTTGT CGCGGCGGGA GGCCGACATC
GCCATCACCG TCGATCGCCC CACCGAGGGA AGGCTGGTGG CATCCAAGCT CGTGGACTAT
TCGCTGGGCC TTTTTGCCTC AAAAGCCTAT GCGGCGGGGC ACGGCCTGCC GCAGAACGCG
GCGGAGCTGG CGCACCATAG GCTCGTCGGC TATGTGCCGG ATCTCGTCTT CAGCCCGACG
CTCGATTATG CGGCGGAAAT CTCGGAACAT TGGGATGCCG CTTTTGCTGT CTCCTCCGCC
ATGGGTCAGG TGGAGGCGGT GCGCGCCGGC GCGGGCATAG GTATCCTGCA CTGCTTCATC
GCACGCGGCA TGGAGGATCT GGTTGCGGTT CCCTTCGCGC AGCCCATCCG GCGTAGCTAT
TGGCTGGTTT TTCACGAATC CATGAGGATG ACCCGACAGA TACAGGCCGC CGCCGCCTTC
ATCGGCGAGA TCGTGGCGCA GGAACGCAGG ATCTTCGCCT GA
|
|---|
| Protein sequence | MDWDDVRVFL AVARAGQILG AARRLGLNHA TVSRRVAALE DAAGAKLFRR LTTGSELTPA
GERLLAAAER MEADMIAARA EIAGEGEDIS GSVRIGAPDG FGVAFLAPRL WRLTERHPRL
SIQLVPVPRS LSLSRREADI AITVDRPTEG RLVASKLVDY SLGLFASKAY AAGHGLPQNA
AELAHHRLVG YVPDLVFSPT LDYAAEISEH WDAAFAVSSA MGQVEAVRAG AGIGILHCFI
ARGMEDLVAV PFAQPIRRSY WLVFHESMRM TRQIQAAAAF IGEIVAQERR IFA
|
|---|
| |