Gene Meso_3300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3300 
Symbol 
ID4183038 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3566782 
End bp3567762 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content62% 
IMG OID638069193 
Producthypothetical protein 
Protein accessionYP_675836 
Protein GI110635628 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.659933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCAGAC ACATATTGAG CGGCTCGGCC GCTCTGGTCG CCGCGGTGGC AATCGCCCTG 
CCTGCCGTTG CACAGGAATG GAGGCCCTCG CGCCCGGTCG ACCTGATCGT ACCCTCGGGC
GCCGGCGGCG GCCACGACAA CAATGCGCGG CTGCTCGGCG CGATCATGGA GAAATATGCC
GGCCAGCCGA TCAACATTAT CAACCAGCCG GCCGGCGGCG GCGTGGTCGC CTATCGCGAG
ATGCGCGACG CCGAGCCGGA CGGGCACAAG ATCGGACAGG TCTCGGTCTC CATCGTCTCC
GACCAGTTTC GCATCGAGGG TGTCGATTAC AACAAGGACT CTTACGCCTA TATCGGCCAG
ATCTCGGCCG ACCAGAACGT GCTGGTGGTT GCTGCCAATG GCCCATATGG CGAGATGGAC
GTAACGCAGT TCATCGAGGC TGCGAAGGCC GAACCGCAAG CGATCGCCTT TGGCGTTTCC
GGCAACTGGA CCAATCACGA CTACACACGT TACCAGATCG AGCAGGCAAC GGGCGCGCAG
TTCCTGCGCG TGCCGATCAA GGGCGGTGCG CAGATCGTGC TCTCGCTACT GTCGGGCGAT
GTGCAGGCGG GCGCGCTCTA CCCGTCCGAG ATCAAGGCGC AGGTCGACGC CGGTCAATTG
AAGCCCCTTG CGCACAACGG ATCCGAGCCG CTCGCGGCTT GGCCGGACGT TCCGAGCTTC
AGTTCCCTCG GACTGGAGGT AAATCTCGCG ATCTGGCGGG CGCTGGTGAT GCCGAAGGAT
ACGCCGGAGG AAATCCGGAA GGGCTGGGAA AGCATCCTCG AGCAGGCCAT GAACGATCCT
GCGCTCAAGG AAGGCTACGC CAATGCTGGA ATTGGTTATG CCTACAGAAA TGCCGAAGAC
ACGATCGAGC TCGTGAACGA AGCGGAAGCC GCTTATCGCT CCATTTCTGA AGCGGCCGGC
GTGCAGAAAG CGTCGCAGTA A
 
Protein sequence
MFRHILSGSA ALVAAVAIAL PAVAQEWRPS RPVDLIVPSG AGGGHDNNAR LLGAIMEKYA 
GQPINIINQP AGGGVVAYRE MRDAEPDGHK IGQVSVSIVS DQFRIEGVDY NKDSYAYIGQ
ISADQNVLVV AANGPYGEMD VTQFIEAAKA EPQAIAFGVS GNWTNHDYTR YQIEQATGAQ
FLRVPIKGGA QIVLSLLSGD VQAGALYPSE IKAQVDAGQL KPLAHNGSEP LAAWPDVPSF
SSLGLEVNLA IWRALVMPKD TPEEIRKGWE SILEQAMNDP ALKEGYANAG IGYAYRNAED
TIELVNEAEA AYRSISEAAG VQKASQ