Gene Meso_3283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3283 
Symbol 
ID4183079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3548185 
End bp3549321 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content62% 
IMG OID638069176 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_675819 
Protein GI110635611 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGCCGC TTGCGGGCTT CAAAGTGGTT GAGTTTGCCG GCGTCGGGCC GGGCCCGATG 
GCGGCCATGC TTATTGCTGA TCTCGGGGCG ACGGTGCTAC GCATCGATCG GGCCAAACCG
GTGGAGCTTG GACGGCCGCG GCCGCTCAAA TACAACCTGC CGCTGCGCAA CCGACACTCG
ATCGCGCTCG ACCTCAAGAA TCCCGATGCG GTTCGCTTCG CGCTGTCGCT CGTGGCGAAG
GCCGATGCGC TTATCGAGGG CTTTCGCCCC GGCGCCATGG AACGCCTGGG TCTGGGACCT
GATGAATGCC TGAAGATGAA CCCACGCCTC ATCTACGGCC GCATGACGGG GTGGGGCCAG
GATGGACCGC TCGCCAAAAC CGCGGGTCAT GACATCAACT ATATCGCGCT TGCCGGCGCG
CTGAACGCCA TTGGCCGGCG GGATCAGCCC CCCTCCATAC CTCTGAATTT TGTCGGAGAT
TTTGGGGGCG GCGCGCTTTA CCTTGCCTTC GGCATCATGG CTGCCGTCTA TGAAGCGCAA
CGCTCAGGCA AAGGGCAGGT GGTGGACGCG GCGATTGTCG ATGGCGTCGC TTCCATGATG
GTGAACTACT GCGGACTGAC AGCAGCCGGA CTTACCTCCC CGCGCGGGAC CGGACCAACC
GATTCGGGCT CGCATTTCTA TGACAGCTAT CAATGCGCGG ATGGCAAATG GGTTTCTGTC
GGCGCAATCG AGAAGCGGTT CTACAAACAG CTTTTGAGCA TTCTTGGCCT AGACCCCGTC
ACTTTGCCGG ACCAATGGGA CCGGGAAGGC TGGCCGACAA TGAAGCAGCG TCTCGCCGAA
ATCTTTTCGA CGAAGACTCA GGCGGAGTGG TGCGCGCTTC TGGAAGGAAC CGACGCCTGC
TTTGCTCCGG TGCTTGAAGT CGGGGATTTA ATGCAACACC CGCACCTCAA AGCAAGGAAG
ACTTACATCA AGGTCGATGA TGTTGTGCAG CCCGCCCCCG CTCCCCGTTT CAGCCGCTCC
CGCCCCGAAC AGCCACGGCC GCCGCAACCC GCCGGAGCGG TACCCTGCGA GGTCGCGCTT
GAAGGATGGC TCGACAGCGC GGCCATTAAC GTGGCGAAAG ACGCGAAACT GATCTGA
 
Protein sequence
MGPLAGFKVV EFAGVGPGPM AAMLIADLGA TVLRIDRAKP VELGRPRPLK YNLPLRNRHS 
IALDLKNPDA VRFALSLVAK ADALIEGFRP GAMERLGLGP DECLKMNPRL IYGRMTGWGQ
DGPLAKTAGH DINYIALAGA LNAIGRRDQP PSIPLNFVGD FGGGALYLAF GIMAAVYEAQ
RSGKGQVVDA AIVDGVASMM VNYCGLTAAG LTSPRGTGPT DSGSHFYDSY QCADGKWVSV
GAIEKRFYKQ LLSILGLDPV TLPDQWDREG WPTMKQRLAE IFSTKTQAEW CALLEGTDAC
FAPVLEVGDL MQHPHLKARK TYIKVDDVVQ PAPAPRFSRS RPEQPRPPQP AGAVPCEVAL
EGWLDSAAIN VAKDAKLI