| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3243 |
|---|
| Symbol | sdhB |
|---|
| ID | 4181096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3510254 |
|---|
| End bp | 3511033 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638069136 |
|---|
| Product | succinate dehydrogenase iron-sulfur subunit |
|---|
| Protein accession | YP_675780 |
|---|
| Protein GI | 110635572 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
|---|
| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCCAAC TTACTCTTCC CAAGAACTCG AAGGTCAAGC AAGGCAAGGT CTGGCCGAAG
CCGGAAGGCG CCACAAACCT GCGCGAATAC CGCATCTATC GCTGGTCGCC GGACGATACG
GAAAATCCGC GCGTCGACAC CTATTATGTC GACCTCGACG ATTGCGGGCC GATGGTGCTG
GACGGGCTCA TCTGGATCAA GAACAAGGTC GATTCGACGC TCACCTTCCG CCGGTCGTGC
CGGGAAGGCA TCTGCGGTTC ATGCGCCATG AATATCGACG GCGCGAACAC GCTTGCCTGC
ACCAAGGGCA TGGACGACAT CGGTGGTGCC GTGCGGGTCT ATCCCCTGCC GCATATGCCA
GTGGTGAAGG ATTTGGTGCC GGATCTCTCG ATCCCCTATG CGCAGCTTTC CTCGATCGAG
CCGTGGCTTC AGACGGTCAC GCCGGAACCC GCGATCGAGT GGAAGCAAAG CCATGAGGAC
CGGGCGAAGC TCGATGGACT CTACGAGTGC ATCCTCTGCT TCTGCTGCCA GACCTCGTGC
CCCAGCTATT GGTGGAACGG CGAGCGCTAT CTGGGGCCTG CCGTGCTGCT CCAGGCCTAT
CGCTGGCTGA TCGATTCGCG CGACGAGGCT ACAGGCGAGC GGCTCGACAA GCTGGAGGAT
CCCTTCCGGC TTTATCGCTG CCACACGATC ATGAACTGCA CGCAGACCTG CCCGAAGGGG
CTCAATCCGG CGAAGGCGAT CGCCGAGATA AAGAAGATGA TGGTGGAGCG GCGGGTTTGA
|
|---|
| Protein sequence | MVQLTLPKNS KVKQGKVWPK PEGATNLREY RIYRWSPDDT ENPRVDTYYV DLDDCGPMVL
DGLIWIKNKV DSTLTFRRSC REGICGSCAM NIDGANTLAC TKGMDDIGGA VRVYPLPHMP
VVKDLVPDLS IPYAQLSSIE PWLQTVTPEP AIEWKQSHED RAKLDGLYEC ILCFCCQTSC
PSYWWNGERY LGPAVLLQAY RWLIDSRDEA TGERLDKLED PFRLYRCHTI MNCTQTCPKG
LNPAKAIAEI KKMMVERRV
|
|---|
| |