Gene Meso_3182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3182 
Symbol 
ID4182272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand+ 
Start bp3452980 
End bp3453639 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content65% 
IMG OID638069075 
Productthiamine-phosphate pyrophosphorylase 
Protein accessionYP_675719 
Protein GI110635511 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.442853 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAG CACCGATCCC CAGCCGCTGC CGCATTGTGC TGATCGCTCC GCCGCCGGAT 
TCCGGCGACG CGGAACGGAT CGAGGCTGCA CTTTCGGGCG GCGACGTCGC TTCCCTGCTC 
ATTCCCGGTT ACGGCGCCGA CGAGAATGAA TTGCAGGCAA GGGCTGAACG GCTCACCCCG 
CTTGCCCAAG CGCGCGGGGT CGCCGTCATC ATTGCCGGCG AGCCGCGTAT CGCCGCCCGC 
GTGCAGGCGG ACGGCGTACA TGTCGACGGC TCCAAGGCGG AGCTGGGAGA TATCATCCAG 
AAACACCAGA AGCGGATGAT GGTCGGCTGC GGCGGGGCGA AGAGCCGCGA TGACGCGCTT 
GAATTGGGCG AAACACAGCC GGACTATATC TTTTTCGGGC GCTTCGGCTA CGACAACAAA 
CCGGAGCCGC ATCCGCGCAA CCTGTCGCTC GGCCGGTGGT GGGCGCAAAT GATCCAGATC 
CCATGCATTG TGCTCGCAGG TTCGGAGATC TCCTCGATCG TGGACGTGGC AAGGACGGGC 
GCCGAGTTCG TCGCCCTCGG CAGCGCGGTC TTTGCGGAGG GGCGCGATCC CGCTGCAATG 
GTAGCCGAGG CCAACGCCCT TCTCGACGCG CACGCTCCCG CGCTTGGGGA AAATGCATGA
 
Protein sequence
MSEAPIPSRC RIVLIAPPPD SGDAERIEAA LSGGDVASLL IPGYGADENE LQARAERLTP 
LAQARGVAVI IAGEPRIAAR VQADGVHVDG SKAELGDIIQ KHQKRMMVGC GGAKSRDDAL 
ELGETQPDYI FFGRFGYDNK PEPHPRNLSL GRWWAQMIQI PCIVLAGSEI SSIVDVARTG 
AEFVALGSAV FAEGRDPAAM VAEANALLDA HAPALGENA