Gene Meso_3174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3174 
Symbol 
ID4182264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3447031 
End bp3447762 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content61% 
IMG OID638069067 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_675711 
Protein GI110635503 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID[TIGR02796] TolQ protein 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGTA TTGAGCTCGC CGCGCCTGGT GGGGATCTCT CCATCTGGGC ACTGTTTTGG 
CAGGCCGGAT GGGTGGTCAA GCTCGTAATG ATCGGCCTGC TTGGCGCCTC TATTTGGAGT
TGGGCCATCA TCATCGACAA GTGGTTGAGC TTCGCGCGGA TGCGGGTGGC ACTCAACCGT
TTCGAGCAGG TCTTCTGGTC GGGCCAATCG CTCGAAGAAC TTTATCGTTC ACTGTCCGAT
CGCAAGACCA GCGGCATGGG CTCGATTTTC GTTGCCGCGA TGCGCGAATG GAAAAAGAGC
TTCGAGAAAG GCGCGCGTTC GCCCCTCGGG CTCCAGACCC GTATCGACAA GGCGATGGAT
CTGGCGCTCA CCCGCGAAAT GGAACGGCTG GAGAGCAAGC TGGGGTTCCT TGCTTCGGTC
GGCGCCTCGG CTCCCTTCAT CGGCCTGTTC GGCACTGTGG TGGGCATCAT GACGTCTTTC
CAGGCGATCG CTGGCTCGAA ATCGACCAAT CTCGCTGTCG TGGCCCCCGG TATCGCCGAG
GCGCTTCTCG CCACGGCCAT CGGCCTTCTC GCGGCCATCC CGGCTGTCAT CGCATACAAC
AAGCTCACGG CGGATGCCGG CAACATCGCC TCGCGGATGG AAGGCTTCGC GGACGAGTTC
TCGGCCATAC TCTCGCGACA AATCGATGAG AAAGTCGCCC CCAAAGCCCG GGCGGTGGAG
GAGTATGCCT GA
 
Protein sequence
MESIELAAPG GDLSIWALFW QAGWVVKLVM IGLLGASIWS WAIIIDKWLS FARMRVALNR 
FEQVFWSGQS LEELYRSLSD RKTSGMGSIF VAAMREWKKS FEKGARSPLG LQTRIDKAMD
LALTREMERL ESKLGFLASV GASAPFIGLF GTVVGIMTSF QAIAGSKSTN LAVVAPGIAE
ALLATAIGLL AAIPAVIAYN KLTADAGNIA SRMEGFADEF SAILSRQIDE KVAPKARAVE
EYA