Gene Meso_3173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3173 
Symbol 
ID4181833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3446582 
End bp3447031 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content59% 
IMG OID638069066 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_675710 
Protein GI110635502 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.673251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGGATGT CGGTCGCTTC GGCTAGGGGC GCAAATGGGC GCCGGCGCAA AGGCCGCCGT 
CATGCGCCTA TGTCCGAGAT CAATGTCACG CCTTTCGTGG ACGTGATGCT GGTGCTGCTC 
ATCATCTTCA TGGTGGCGGC GCCTCTCTTG ACCGTAGGCG TTCCGATCGA TCTGCCCGAA 
ACCCAGGCAA GGGCGCTGAA CTCGGAAACA CAGCCGATCA CCGTCTCCGT CAACAGCGAA 
GGCCTGATCT ATCTGCAGGA AACGGAAATA CCGCTCGAAG AGGTGGTGCC GAAGCTGCAG 
GCTATCGCTC AGGCAGGCTA TGAAGAGCGA ATTTATGTAC GTGGCGACCG TAACGCGGAT 
TATGGCACGG TCATGCGCGT GATGGCGCGC GTTTCAGCCG CCGGTTTCCG CAATCTCGGA 
CTGGTCACAT TGCAGGAACA GGATAACTGA
 
Protein sequence
MGMSVASARG ANGRRRKGRR HAPMSEINVT PFVDVMLVLL IIFMVAAPLL TVGVPIDLPE 
TQARALNSET QPITVSVNSE GLIYLQETEI PLEEVVPKLQ AIAQAGYEER IYVRGDRNAD 
YGTVMRVMAR VSAAGFRNLG LVTLQEQDN