| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3171 |
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| Symbol | tolB |
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| ID | 4181831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3444168 |
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| End bp | 3445487 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638069064 |
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| Product | translocation protein TolB |
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| Protein accession | YP_675708 |
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| Protein GI | 110635500 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0216692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGAACT TTTTCAAAAC GGCCGTCGCG ATTACAAGCC TTGTCATGGG GCTCGTAGCA
ATGGCTGTCG TGCCGGCGCG CGCGCTTGTG GAAATCGATG TCAATCGCGG CGTCGTCGAG
CCGGTGCCGA TCGCCATCAC GGACTTCCTG TCCGCTGGAG GGCGGGGCGC CGAGATATCC
GCCGTGATCG CCGCCGATCT TAAGCGTTCC GGCCTTTTCG CGCCCATAGA CCGCGGCGCC
TTCATCGAGA AGATTTCCAA TCCGGACGTG GCTCCGCGTT TCGAGGATTG GAAGGTCATC
AATGCGCAGG CGATCGTCAC GGGCCGCGTG ACCGAGGAGC CAGGCGGCAG GCTCAAGGCC
GAGTTCCGCC TTTGGGACAC CTTCGCCGGA CAGCAGCTCG TGGGCGAGCA GTTCTTTGCC
AAGCCGGCGG ATTGGCGCCG CGTCGCGCAT ATCATTGCCG ATACGATCTA TGAGCAGTTC
ACCGGCGAGA AGGGCTATTT CGACAGCCGC ATCGTTTTCG TGGACGAGTC CGGGTCGAAG
GAAAACCGCG TGAAACGGTT GGCCATTATG GATCAGGACG GGGCCAATTA CAGGGCGCTG
ACCGATGGCC GCTCCATCGT GCTGAAGCCG AGCTTCTCGC CTCAGCGGCA GGAAATCACC
TATGTGTCCT TCGAAGGGGG GCAGCCTCAG GTCTATCTGC TGCAAATCGA AACCGGCCAG
CGCGAGCTTG TGGGAAACAA TTTCCCGACA ATGAGCTTCG CGTCGCGCTT CAATCCGGTC
GGCGACAAGA TCATCATGAG CCTGCTTCGT ACGGACGGCA ATTCAAACAT CTATACCATG
GATCTGAAGA CGCGGACCAC CGCGCGGCTC ACGGATACCA ATGCCATCGA CACCTCCCCA
TCCTATTCGC CCGATGGCAA CAAGGTGGTC TTCACCTCCG ATCGTGGCGG GCGGGCGCAA
ATCTATGTGA TGAATGCTGA TGGTTCCAAC CCGCAGCGCA TCTCCTTCGG CGACGGCACC
TATTCAGAAC CCGTGTGGTC TCCGCGAGGC GATCTGATCG CGTTCACCAA ACAGTCCGGC
GGCCAGTTCC AGATCGGCAT CATGCGCACG GATGGATCCG GGGAACGCAT TCTGTCCACC
GGTTTCCAGA TCGAAGGGCC GACCTGGTCC CCGAACGGTC GGGTCATCAT GTTCTTCCGG
CAGGATGCCG GGGCGGCGGG GCCGAAGCTC TATTCGATCG ACCTTACGGG CCGTAACGAG
CAACTCATCC CGACGCCGAA TTTCGCCTCC GATCCCGCGT GGTCTCCGCT ACTGAACTAG
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| Protein sequence | MRNFFKTAVA ITSLVMGLVA MAVVPARALV EIDVNRGVVE PVPIAITDFL SAGGRGAEIS
AVIAADLKRS GLFAPIDRGA FIEKISNPDV APRFEDWKVI NAQAIVTGRV TEEPGGRLKA
EFRLWDTFAG QQLVGEQFFA KPADWRRVAH IIADTIYEQF TGEKGYFDSR IVFVDESGSK
ENRVKRLAIM DQDGANYRAL TDGRSIVLKP SFSPQRQEIT YVSFEGGQPQ VYLLQIETGQ
RELVGNNFPT MSFASRFNPV GDKIIMSLLR TDGNSNIYTM DLKTRTTARL TDTNAIDTSP
SYSPDGNKVV FTSDRGGRAQ IYVMNADGSN PQRISFGDGT YSEPVWSPRG DLIAFTKQSG
GQFQIGIMRT DGSGERILST GFQIEGPTWS PNGRVIMFFR QDAGAAGPKL YSIDLTGRNE
QLIPTPNFAS DPAWSPLLN
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