Gene Meso_3170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3170 
Symbol 
ID4181830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3443483 
End bp3444001 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content68% 
IMG OID638069063 
ProductOmpA/MotB 
Protein accessionYP_675707 
Protein GI110635499 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID[TIGR02802] peptidoglycan-associated lipoprotein 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.190216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCGTA TCGCAGCTCT GACGAGAAAC CCTGTCGCCA TCGCCCTGGT AGCCGCGCTT 
GCCGTCGCCG GATGCCGCTC CAACAAGCAG GTCCCCAATT CGGCGGCCGA TCTCGGTCTC
GGCGCCGGCG GCGTGGCCGG AACCGCCACC CCCGGCTCGA AGCAGGAGTT TACGGTTGCC
ATCGGCGATC GCATCTTCTT CGACACCGAT TCCTCGGTGA TCCGCGCGGA CGCCCAGGCC
ACGCTGGCCC GCCAGGCACA ATGGCTCAAC CAGTACCCCT CCTATTCGGT CACCGTCGAG
GGCCATGCCG ACGAACGCGG CACGCGCGAA TACAATCTGG CGCTCGGCGC CCGCCGCGCC
GCCGCCGCGC GCGACTTCCT GGTCTCCCGC GGCGTGGCCG CAAACCGCAT CCAAACGATC
TCCTATGGCA AGGAGCGTCC GGTCGCCGTT TGCGACGACA TCTCCTGCTG GTCGCAGAAC
CGGCGCGCAG TGACGGTGCT GAACGGCGCC GGCAGCTGA
 
Protein sequence
MRRIAALTRN PVAIALVAAL AVAGCRSNKQ VPNSAADLGL GAGGVAGTAT PGSKQEFTVA 
IGDRIFFDTD SSVIRADAQA TLARQAQWLN QYPSYSVTVE GHADERGTRE YNLALGARRA
AAARDFLVSR GVAANRIQTI SYGKERPVAV CDDISCWSQN RRAVTVLNGA GS