Gene Meso_3167 details

Gene Information

• Locus tag: Meso_3167
• ID: 4181827
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chelativorans sp. BNC1
• Kingdom: Bacteria
• Replicon accession: NC_008254
• Strand: -
• Start bp: 3438920
• End bp: 3440857
• Gene Length: 1938 bp
• Protein Length: 645 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 638069060
• Product: membrane protease FtsH catalytic subunit
• Protein accession: YP_675704
• Protein GI: 110635496
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0465] ATP-dependent Zn proteases
• TIGRFAM ID: [TIGR01241] ATP-dependent metalloprotease FtsH

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.0347357
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCAA ATTATAGAAA TTTCGCGCTA TGGGCGATCA TCGCGGTCTT GCTCATTGCG 
CTGTTCAACC TGTTTCAGGC GCCGCAGCAG CGTGGGGCCA CTCGGGACAT TGCCTACTCT 
CAATTTCTCG AAGAGGTCTC ACAGGGTCGC GTTGAAAGCG TCACCATCAC CGGCAGTCGG 
ATCTCCGGCA CTTATACGGA CAACCGCACG CCGTTTCAGA CCTATTCTCC CGGCGATCCC 
AGTCTCGTCC AGCGGCTTGA AGAACACAAT GTGACGATCA CGGCCCGCCC CGAGTCTGAC 
GGTTCCAACT CCATCCTCGG CTATTTCATC TCCTGGCTGC CGATGATCCT GATCCTGGCG 
GTCTGGATTT TCTTCATGCG GCAGATGCAG TCGGGGTCCG GCCGCGCAAT GGGCTTCGGC 
AAGTCCAAGG CCAAGCTTCT GACCGAGGCG CATGGGCGCG TCACCTTCCA GGATGTAGCC 
GGTGTGGATG AAGCCAAGCA GGATCTAGAG GAGATCGTCG AGTTCCTGCG CGATCCGCAG 
AAATTCCAGC GCCTCGGCGG CAAGATTCCG CGCGGCGTGC TGCTCGTCGG CCCTCCCGGC 
ACTGGCAAGA CGCTGCTCGC GCGATCCGTC GCGGGCGAGG CGAATGTGCC GTTCTTTACC 
ATTTCCGGTT CGGATTTCGT CGAGATGTTC GTCGGCGTGG GCGCAAGCCG TGTGCGCGAC 
ATGTTCGATC AGGCGAAGAA GAACGCGCCC TGCATCATCT TCATCGATGA GATCGATGCG 
GTCGGCCGTC ACCGCGGCGC GGGCCTGGGC GGCGGCAATG ACGAGCGCGA GCAGACGCTG 
AACCAGTTGC TGGTGGAGAT GGACGGGTTC GAAGCCAATG AAGGCATCAT CCTGATCGCG 
GCCACCAACC GGCCGGACGT GCTTGACCCC GCGCTCTTGC GTCCGGGCCG TTTCGACCGT 
CAGGTGGTCG TGCCCAATCC GGACATCGTG GGCCGCGAAA AGATCCTCAA GGTGCATGTG 
CGGAATGTGC CGCTGGCTCC CAATGTCGAT CTGAAGACCA TTGCGCGCGG CACCCCCGGC 
TTCTCCGGCG CCGACCTCGC CAATCTGGTC AACGAGGCCG CGCTGATGGC CGCGCGCCGC 
AACAAGCGCC TCGTCACGAT GGCTGAATTC GAGGACGCCA AGGACAAGGT CATGATGGGT 
GCGGAGCGCC GCTCGCACGC AATGACCCAG GAAGAGAAGG AGCTGACCGC CTTTCACGAG 
GCGGGCCATG CCGTGGTGGC GCTCAACGTG CCCGCTTCCG ACCCTGTCCA CAAGGCCACT 
ATCATCCCGC GTGGCCGCGC GCTCGGCATG GTCATGCAGC TGCCCGAGGG CGACCGCTAT 
TCCATGAGCT ACAAATACAT GATCTCCCGC CTGGCGATCA TGATGGGCGG GCGTGTCGCC 
GAGGAGCTGA AATTCGGCAA GGAGAACATC ACTTCAGGTG CCGCTTCCGA TATCGAGCAG 
GCCACCAAGC TGGCGCGCGC CATGGTCACG CGCTGGGGCT TCTCCGACAA GCTTGGCCAG 
GTGGCTTATG GCGAGAACCA GGAAGAGGTC TTCCTTGGCC ATTCCGTCAC GCGCCAGCAG 
AACATGTCGG AGGAGACGCA GCAGAAGATC GACGACGAGG TGCGCCGGCT GATCGACGAG 
GCCCATGAGA AAGCGCGGGA GATCCTTACG ACCAAGCGCG ATGCCTGGAT CGCCGTTGCG 
GAAGGCCTGC TTGAATACGA GACGCTGTCG GGCGAGGAGA TCCAGGCGAT CATCCGCGGC 
GAAAAGCCTG CGCGGGACCT CGGCGACGAC ACGCCTCCTT CACGCGGTTC CACTGTGCCC 
AAGGCCGGTG TGCGCAAAGA GGGCAAGAAG GGCGGCGAGG AACCCGACGC TGGCCTGGAG 
CCGCAGCCTC AAGGCTAA 

 

Protein sequence

MNPNYRNFAL WAIIAVLLIA LFNLFQAPQQ RGATRDIAYS QFLEEVSQGR VESVTITGSR 
ISGTYTDNRT PFQTYSPGDP SLVQRLEEHN VTITARPESD GSNSILGYFI SWLPMILILA 
VWIFFMRQMQ SGSGRAMGFG KSKAKLLTEA HGRVTFQDVA GVDEAKQDLE EIVEFLRDPQ 
KFQRLGGKIP RGVLLVGPPG TGKTLLARSV AGEANVPFFT ISGSDFVEMF VGVGASRVRD 
MFDQAKKNAP CIIFIDEIDA VGRHRGAGLG GGNDEREQTL NQLLVEMDGF EANEGIILIA 
ATNRPDVLDP ALLRPGRFDR QVVVPNPDIV GREKILKVHV RNVPLAPNVD LKTIARGTPG 
FSGADLANLV NEAALMAARR NKRLVTMAEF EDAKDKVMMG AERRSHAMTQ EEKELTAFHE 
AGHAVVALNV PASDPVHKAT IIPRGRALGM VMQLPEGDRY SMSYKYMISR LAIMMGGRVA 
EELKFGKENI TSGAASDIEQ ATKLARAMVT RWGFSDKLGQ VAYGENQEEV FLGHSVTRQQ 
NMSEETQQKI DDEVRRLIDE AHEKAREILT TKRDAWIAVA EGLLEYETLS GEEIQAIIRG 
EKPARDLGDD TPPSRGSTVP KAGVRKEGKK GGEEPDAGLE PQPQG