| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3156 |
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| Symbol | |
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| ID | 4181816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3425038 |
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| End bp | 3425964 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638069049 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_675693 |
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| Protein GI | 110635485 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00251516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCAGA CATTGCCAAG CATTGTTTCT GGCGAGGGTG GTCTCACCCG CTATCTCGAG
GAAATCCGCA GATTTCCCAT GCTTCAGCCG GAGGAAGAGT ACATGCTTGC GAAGCGATAT
CGCGAGCATG ATGACACCGA CGCCGCGCAT AAGCTTGTGA CCAGCCATCT GCGGCTCGTG
GCGAAGATCG CCATGGGCTA CCGCGGCTAT GGCCTGCCCA TCGGAGAGGT GATCTCCGAG
GGAAATGTAG GCCTCATGCA GGCCGTCAAG AAATTCGAAC CCGAGCGCGG CTTCCGTCTG
GCCACATATG CTATGTGGTG GATCAAGGCC GCGATACAAG AATACATCTT GCGTTCGTGG
AGCCTCGTGA AAATGGGCAC CACGGCCAAC CAGAAGCGGC TGTTCTTCAA CCTGCGCAAG
GTGAAGGGCA AGATCCAGGC TCTGGACGAA GGCGATCTCA ATCCCGAGCA GGTCTCGGAG
ATCGCCACCC GCCTCAACGT GAGCGAGGAA GAGGTCATCT CCATGAATCG CCGCTTGTCC
GGCGACGCTT CGCTCAACGC GCCGATTCGC GCGACTGAGG GCGAGTCCGG TGAGTGGCAG
GACTGGCTCG TGGATGAGCA CGAGAACCAG GAGGAGATGC TGGTCGAACA GGACGAGCTC
GAATCCCGCC GGCGCATGCT GGAGGACGCG ATGGACGTTC TGAACGACCG CGAACGCCGC
ATCTTCGAGG CACGCCGCCT CTCCGACGAG CCGATGACGC TGGAAGAACT CTCTGGCGAG
TTTGATATCA GCCGCGAGCG TGTGCGCCAG ATCGAAGTCC GCGCTTTCGA AAAAGTGCAG
GAGGCCGTCA AGGCTTCGGC GAAGCGCCAA GCCCAGGCAC TTCGCTCCGC GCCGCTACCG
GGCGAAAGTC AGCACGCTTC AATCTGA
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| Protein sequence | MAQTLPSIVS GEGGLTRYLE EIRRFPMLQP EEEYMLAKRY REHDDTDAAH KLVTSHLRLV
AKIAMGYRGY GLPIGEVISE GNVGLMQAVK KFEPERGFRL ATYAMWWIKA AIQEYILRSW
SLVKMGTTAN QKRLFFNLRK VKGKIQALDE GDLNPEQVSE IATRLNVSEE EVISMNRRLS
GDASLNAPIR ATEGESGEWQ DWLVDEHENQ EEMLVEQDEL ESRRRMLEDA MDVLNDRERR
IFEARRLSDE PMTLEELSGE FDISRERVRQ IEVRAFEKVQ EAVKASAKRQ AQALRSAPLP
GESQHASI
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