Gene Meso_3148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3148 
Symbol 
ID4183101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3417433 
End bp3418320 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content61% 
IMG OID638069041 
Productpolar amino acid ABC transporter, inner membrane subunit 
Protein accessionYP_675685 
Protein GI110635477 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTTCTGT GGCCAGCAAT CAAGAGCGTC ACACGCGGGC AGAAGGCGCG GGATGCGGTT 
GCGGCCCACG ATCTGATCAC CGCGCGGATC GAGACGGCCA GTGCACTCAA CTACGCGCAT
TATACGGTCG GCTTTGCCGC CCTCTTCGTG GTGGTCATCG CCCTTGCGCA GTTTCTGATG
GCGAACAATC TCGCCGTCAG CCGCACCTTC CTGTCCGTAC CGCTGCTCGA CCTGTCGTTT
CCCCTCATCC TGAAGGCGTT CTGGGTCAAT ATCTATATCT TCGTCGTAGC CGAAATATGC
GTCCTCGTCT GGGGCCTGAT CGTCGCGGTG GCGCGGCTCA TCCCCGGCAA AACGGCCGCA
CCAATCCGGG CGATCGCAAC GCTCTATACC GACATTTTCC GCGGTATGCC CGCGATCATC
ACGATTTACC TGATCGGGTT CGGCCTGCCG CTGAGCGGCC TGCCGATCCT CAAGGATCTT
TCGGTCGAGA CCTATGCCAT CATCGCATTG ACGCTTACCT TCGGCGCCTA TGTCGCCGAG
GTCTACCGCG CCGGCATCGA AAGCATTCAC TGGAGCCAGG TGGCCGCCGC CCGTTCGCTC
GGCCTCACCT ACATGCAGAC GATGCGCTAC GTCATTGTGC CCCAGGCGGT GCGCCGTATC
GTCCCGCCGC TTCTTAACGA TTTCATCGGC CTGCAGAAGG ATACCGCTCT CGTTAACGTC
ATCGGCTCCA TCGATGCCTT CAACCAGGCG AAGATCCTAT CGAGCAACTA TTTCAACCTC
TCGCCCGTCA CCGTGGTGGC CTTCCTCTTC GTGGTAATCA CCATTCCGCA GGCCCGGTTC
GTTGACCGGA TACTCGAAAG GGAGCAGCGG CGCACGCGCG CCGGGTAA
 
Protein sequence
MLLWPAIKSV TRGQKARDAV AAHDLITARI ETASALNYAH YTVGFAALFV VVIALAQFLM 
ANNLAVSRTF LSVPLLDLSF PLILKAFWVN IYIFVVAEIC VLVWGLIVAV ARLIPGKTAA
PIRAIATLYT DIFRGMPAII TIYLIGFGLP LSGLPILKDL SVETYAIIAL TLTFGAYVAE
VYRAGIESIH WSQVAAARSL GLTYMQTMRY VIVPQAVRRI VPPLLNDFIG LQKDTALVNV
IGSIDAFNQA KILSSNYFNL SPVTVVAFLF VVITIPQARF VDRILEREQR RTRAG