| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3134 |
|---|
| Symbol | |
|---|
| ID | 4183204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 3401348 |
|---|
| End bp | 3402292 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638069026 |
|---|
| Product | succinylglutamate desuccinylase/aspartoacylase |
|---|
| Protein accession | YP_675671 |
|---|
| Protein GI | 110635463 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3608] Predicted deacylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.100707 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCAAAT CGACAAGGAT CCTGCGGCCA AGATTCACGA CCCACGCGGA CGGCTCCGAC
GCAGTGCTCG TCATGCACGA GCTCATAGGC GAAACGGACG GGCCGACAAT CGGCCTTTCG
GCGGCGATCC ACGGCAACGA GAACACTGGC GCGCAGGCGA TGCTCGATAT CTACCGAGCC
ATCAAGGACA TGCCGCTGAA GGGCCGTATC CTAATGTTGC CGGTGGCCAA TGCGCGGGCC
ATGGCGGTCA ATCACCGTTT CACGCCGATA GATGAGCTGA ACCTCAACCG CGAGTTCCCC
GGCAACCGCA ACGGCAACTA TACCCAGCAG CTTGCTGCCG CTATCACCTC GGAATTCCTG
GAGAAGATCG ATGTTCATAT CGATCTCCAT GCGGGTACGG ATCGGCCCAC GGTCGACTAT
GTCTATATCT GGAACGACGA AGCGCTGTCG CGCGCCTTCG GCTCCAAGAT CCTGTACCGC
CCGGCGCCCG ACAAGGACGG AACCGTGTTT ACCGGCACGA CAAAAGCCGT GACAATCGAC
AAGCGGAACA TTCCGGCCGT GGTGGTCGAG CTCGGCGGCG GCATCGTCGA CCAGACCCCT
TACGTAGAGC GCACGGTGAA CGGCGTGCTC AACATGCTCC GCCATCTCGG CGCGATCCCC
GGCGATGTGA AGCCCGCGCC GAAACAGGTG GTGGTGGACG AGATCGCCGG CATCCGGCCG
ACACAGGGAG GCTGGCTGGA ACCGCTCTGC CCGCCGCTTG GCGAGGCGAT CGGGAAGGGC
CAGCTTCTCG GCCGGGTGGT GAGCCCCTAC ACCTTCGAGA CGCTGGAAGA GATCCCCAAT
CCGTTCGAGC GTGGCATCAT GATCCTGTCG CACCTGTCAC GAAACCTCGT GGAGAGCGGC
GATTACGGCT TCATGGTGGG CAATCTCGCG CGAGCGACGG ACTGA
|
|---|
| Protein sequence | MVKSTRILRP RFTTHADGSD AVLVMHELIG ETDGPTIGLS AAIHGNENTG AQAMLDIYRA
IKDMPLKGRI LMLPVANARA MAVNHRFTPI DELNLNREFP GNRNGNYTQQ LAAAITSEFL
EKIDVHIDLH AGTDRPTVDY VYIWNDEALS RAFGSKILYR PAPDKDGTVF TGTTKAVTID
KRNIPAVVVE LGGGIVDQTP YVERTVNGVL NMLRHLGAIP GDVKPAPKQV VVDEIAGIRP
TQGGWLEPLC PPLGEAIGKG QLLGRVVSPY TFETLEEIPN PFERGIMILS HLSRNLVESG
DYGFMVGNLA RATD
|
|---|
| |