Gene Meso_3112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_3112 
Symbol 
ID4183260 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3379491 
End bp3380276 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content60% 
IMG OID638069004 
ProductABC transporter related 
Protein accessionYP_675649 
Protein GI110635441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.856974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACTG GGACACCGCT CGTTGAAATG AAGAACATCT CGATCGCCTT CGGCGGCATT 
CATGCCGTCG AGAACGTATC GGTGGACCTC TTCGCGGGTG AAGTGGTGGC TCTCGTGGGC
CATAACGGGG CTGGCAAATC TACGCTGATC AAGATCCTTT CGGGCGCCTA CAAACGAGAT
GCCGGAACCA TCCTCATCAA TGGTGAGGAA GCGCAGATCA ACAATCCCCG CGACGCCAAG
AAATACGGCA TCGAAACGAT CTACCAGACG CTTGCCCTGG CCGACAATGT CGACGCGGCG
GCCAATCTGT TCCTCGGACG CGAGCTCAGG ACGGCTTGGG GCACGCTGGA CGACGTTGCC
ATGGAGTCGG AAACGCGCAA GGTCATGGGC CGGCTCAATC CTCGTTTTCA GCGCTTCAAG
GATCCGGTCA GCAATCTTTC CGGCGGTCAG CGGCAGACCG TGGCGATCGC TCGCGCCATT
TACTTCAATG CGCGCATTCT CATCATGGAC GAGCCCACGG CCGCGCTCGG GCCGCAGGAG
GCAGCCCAGG TGGGCGACCT GGTTCGCCAG CTCAAGACGG AAGGGCTCGG CATTTTTCTG
ATCAGCCACG ACATTCACGA CGTGTTCGAT CTGGCCGATC GCGTCGTCGT CATGAAAAAC
GGGCAGGTGG TGGGCACGGC GTCCACGGCG GATGTCACTG AGGACGATGT TCTCGGAATG
ATCATTCTTG GAAAGTGCCC GCCCGGCGCG ATACCCGGGC CCGGCGCATT GCAGATCGCC
GCCTGA
 
Protein sequence
MDTGTPLVEM KNISIAFGGI HAVENVSVDL FAGEVVALVG HNGAGKSTLI KILSGAYKRD 
AGTILINGEE AQINNPRDAK KYGIETIYQT LALADNVDAA ANLFLGRELR TAWGTLDDVA
MESETRKVMG RLNPRFQRFK DPVSNLSGGQ RQTVAIARAI YFNARILIMD EPTAALGPQE
AAQVGDLVRQ LKTEGLGIFL ISHDIHDVFD LADRVVVMKN GQVVGTASTA DVTEDDVLGM
IILGKCPPGA IPGPGALQIA A