Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_3112 |
Symbol | |
ID | 4183260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | - |
Start bp | 3379491 |
End bp | 3380276 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638069004 |
Product | ABC transporter related |
Protein accession | YP_675649 |
Protein GI | 110635441 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.856974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATACTG GGACACCGCT CGTTGAAATG AAGAACATCT CGATCGCCTT CGGCGGCATT CATGCCGTCG AGAACGTATC GGTGGACCTC TTCGCGGGTG AAGTGGTGGC TCTCGTGGGC CATAACGGGG CTGGCAAATC TACGCTGATC AAGATCCTTT CGGGCGCCTA CAAACGAGAT GCCGGAACCA TCCTCATCAA TGGTGAGGAA GCGCAGATCA ACAATCCCCG CGACGCCAAG AAATACGGCA TCGAAACGAT CTACCAGACG CTTGCCCTGG CCGACAATGT CGACGCGGCG GCCAATCTGT TCCTCGGACG CGAGCTCAGG ACGGCTTGGG GCACGCTGGA CGACGTTGCC ATGGAGTCGG AAACGCGCAA GGTCATGGGC CGGCTCAATC CTCGTTTTCA GCGCTTCAAG GATCCGGTCA GCAATCTTTC CGGCGGTCAG CGGCAGACCG TGGCGATCGC TCGCGCCATT TACTTCAATG CGCGCATTCT CATCATGGAC GAGCCCACGG CCGCGCTCGG GCCGCAGGAG GCAGCCCAGG TGGGCGACCT GGTTCGCCAG CTCAAGACGG AAGGGCTCGG CATTTTTCTG ATCAGCCACG ACATTCACGA CGTGTTCGAT CTGGCCGATC GCGTCGTCGT CATGAAAAAC GGGCAGGTGG TGGGCACGGC GTCCACGGCG GATGTCACTG AGGACGATGT TCTCGGAATG ATCATTCTTG GAAAGTGCCC GCCCGGCGCG ATACCCGGGC CCGGCGCATT GCAGATCGCC GCCTGA
|
Protein sequence | MDTGTPLVEM KNISIAFGGI HAVENVSVDL FAGEVVALVG HNGAGKSTLI KILSGAYKRD AGTILINGEE AQINNPRDAK KYGIETIYQT LALADNVDAA ANLFLGRELR TAWGTLDDVA MESETRKVMG RLNPRFQRFK DPVSNLSGGQ RQTVAIARAI YFNARILIMD EPTAALGPQE AAQVGDLVRQ LKTEGLGIFL ISHDIHDVFD LADRVVVMKN GQVVGTASTA DVTEDDVLGM IILGKCPPGA IPGPGALQIA A
|
| |