| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_3040 |
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| Symbol | |
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| ID | 4180657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3312222 |
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| End bp | 3313487 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638068931 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_675577 |
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| Protein GI | 110635369 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.365095 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCACT TCCAATATCG CGACGGCGTG CTGCATGCCG AGAATGTGCC GATACCGCGG
ATAACGGCGG CAGTCGGCAC ACCTTTTTAC TGTTACTCGA CAGCCACGCT GGAACGCCAT
TACCGGGTGT TTTCCGAAGC GCTTTCCGGC CTCGACGCGC TCGTCTGCTA CGCGATGAAA
GCGAATTCAA ACCAGGCGGT GCTAAAGACG CTCGGAAATC TGGGAGCGGG GGCGGACGTC
GTCTCCCAAG GCGAGTTGCG CCGCGCGCTG GCAGCCGGAA TTCCGGCGAA CAAGATCCTC
TTTTCCGGCG TTGGCAAGAC CGGTGAGGAG ATGGATTTCG CGCTTTCCGC GGGCATTTTG
TGTTTCAATG TGGAATCCTT GCCAGAGCTT GAACTGCTCT CCGCCCGCGC CCGCGCAATA
GGCGTTAAGG CGCCGGTGTC GCTGCGCATC AATCCGGATG TGGACGCGAA AACGCACAAG
AAGATCTCAA CCGGCAAATC CGAGAACAAG TTCGGCATCC CCTGGAAGGA TGCTCGCGCG
GCCTATGCCC GCGCGGCGAG CCTTCCAGGC CTCGAAGTCA CTGGCATCGA CATGCATATC
GGTAGCCAGA TCACCGAGCT GCAGCCGTTT GACCAGGCTT TTGCCCTTCT GACCGAGCTG
ACGGAGACGC TTCGCGCGGA TGGTCACGCC ATCAAGCATG TGGACCTTGG AGGCGGACTG
GGTGTACCCT ACCGGGAAGA CAACGAGCCG CCGCCTCTAC CGGATGCCTA TGCCGAGGTG
GTGCGCAGGC ATGTGACGCG TTTGGGCCTG AAAGTGATCT TCGAGCCCGG GCGCCTCATC
GTGGGCAATG CCGGGGTTCT GATCTCGCGG GTGCTTTACC TGAAGGAAGG CGAAGGGAAG
AACTTCCTCA TTATCGATGC GGCGATGAAC GACCTCATTC GCCCGACACT CTACGATGCG
TATCACACGA TCCGCCCCGT TGCCGAACCG GCAGCGGATG CGCCGCACCT CAAAGCGGAT
GTGGTGGGGC CGGTCTGCGA GACGGGCGAC TTCCTGGCGC TCGACCGCGA TCTGCCCAGG
ATGGAACCGG GCGACCTGAT TGCAGTCGGC ACTGCCGGCG CCTATGGCGC GGTGCTGTCG
AGCACCTACA ATTCCCGCCT GCTGGTGCCG GAAGTTCTGG TGAATGGGGA TCGCTTCCAT
ATCGTGAGGC CGCGCCCCAC CTATGAGCAG CTGATCGCCC TCGATTCCCT TCCAGACTGG
CTTTAG
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| Protein sequence | MNHFQYRDGV LHAENVPIPR ITAAVGTPFY CYSTATLERH YRVFSEALSG LDALVCYAMK
ANSNQAVLKT LGNLGAGADV VSQGELRRAL AAGIPANKIL FSGVGKTGEE MDFALSAGIL
CFNVESLPEL ELLSARARAI GVKAPVSLRI NPDVDAKTHK KISTGKSENK FGIPWKDARA
AYARAASLPG LEVTGIDMHI GSQITELQPF DQAFALLTEL TETLRADGHA IKHVDLGGGL
GVPYREDNEP PPLPDAYAEV VRRHVTRLGL KVIFEPGRLI VGNAGVLISR VLYLKEGEGK
NFLIIDAAMN DLIRPTLYDA YHTIRPVAEP AADAPHLKAD VVGPVCETGD FLALDRDLPR
MEPGDLIAVG TAGAYGAVLS STYNSRLLVP EVLVNGDRFH IVRPRPTYEQ LIALDSLPDW
L
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