| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2998 |
|---|
| Symbol | |
|---|
| ID | 4182413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 3265914 |
|---|
| End bp | 3266780 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638068888 |
|---|
| Product | HemK family modification methylase |
|---|
| Protein accession | YP_675535 |
|---|
| Protein GI | 110635327 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG2890] Methylase of polypeptide chain release factors |
|---|
| TIGRFAM ID | [TIGR00536] HemK family putative methylases
[TIGR03534] protein-(glutamine-N5) methyltransferase, release factor-specific |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.29427 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCGA TCACGCTCGC TGCTCTGTTG CGAACTGCCC GGCAGCAACT GACGAGCGCC
GGTGTGGAGG ACGCGGCCTT GGAGGCGCGG CTGATCGTCG AGCATTTTTC CGAAACGACA
CAGACCCAGG CCATCACGCA TCCCGAGTGC GCGGTGGAAG CCGCCGTGGC GGAAAAGGTG
GCGCGGGCGG TGGAACGGCG GATCGCGGGC GAGCCTGTCC ACCGCATCCT CGGCCATCGT
GACTTTTATG GATTGAAGCT TGCGCTTTCG CCAGAAACGC TGGAGCCACG GCCGGATACG
GAGACGCTGG TCGACCTCGT ACTGCCGGAA GCGCGACGGA TCGCAAACGT CAAAAAGCAT
TGCCGCATTC TCGATCTTGG GACTGGAACG GGCGCGATTG CGCTTGCTCT TCTAAGCGTT
GTGCCTGAAG CCGAAGCCGT GGGAACCGAT ATTTCGGAAG GGGCTCTTGA AACGGCGCGT
CACAATGCCG ACATGAGTTT TGTTGCAGAG CGGTTCACCC CTCTGCGGTC GGATTGGTTT
CGGAATGTGG ATGGCCGATT CGACCTGATT GTTTCCAACC CGCCCTATAT CGCAACGGCG
GAAATGGAAA CGCTGCCGCG CGAAGTGCGC GAGCATGATC CGAAGGCGGC ACTCGATGGC
GGTCCGGATG GGCTCATGCC CTATAGAGCG ATCGCCAGCG GAGCGCGGGA TCACTTGACG
AGGGAGGGTC TTATCGCCGT GGAAACAGGT GCCGAACAGA AAGCTGCCGT GGCGGCCATT
TTCGCTGCCG AAGGCTATGC GGTTTCAAGA ACCGCACGCG ATCTGGGCGG CCGAGACCGC
GCGATGCTGT TTGCCCCAAC CGCCTAA
|
|---|
| Protein sequence | MPPITLAALL RTARQQLTSA GVEDAALEAR LIVEHFSETT QTQAITHPEC AVEAAVAEKV
ARAVERRIAG EPVHRILGHR DFYGLKLALS PETLEPRPDT ETLVDLVLPE ARRIANVKKH
CRILDLGTGT GAIALALLSV VPEAEAVGTD ISEGALETAR HNADMSFVAE RFTPLRSDWF
RNVDGRFDLI VSNPPYIATA EMETLPREVR EHDPKAALDG GPDGLMPYRA IASGARDHLT
REGLIAVETG AEQKAAVAAI FAAEGYAVSR TARDLGGRDR AMLFAPTA
|
|---|
| |