Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2988 |
Symbol | |
ID | 4181424 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3249095 |
End bp | 3249820 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638068872 |
Product | histidine utilization repressor |
Protein accession | YP_675525 |
Protein GI | 110635317 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | [TIGR02018] histidine utilization repressor, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGATAG AAGATAGCAG CGGCACCACC CTCCATCAGC GCATCCTGAA CGATATTGAA GGCCGGATCA TCTCCGGCGC GTGGCCGCCC GGTTACCGCC TGCCGTTTGA GGTCGATCTG GCCGTTCAAT ACGGCTGCTC CCGCATGACT GTGAATAAGG TTATGACGCA GCTTGCAAAG TCGGGCCTGA TCGAGCGGCG GAAGAAGTCC GGCACCTTTG TGGCTCATCC ACAGGCACAA TCGGCGGTGC TGGAAATCCA CGATATCCGA GAAGAAGTAC AATCTCTGAA CCTCAGCTAC GGCTATCGGC TCCTGTCTCG CACCTGCCGC AAGGCCGGCA CGGAAGATCT GCGGCGGCTC GGAGTTTCGA AGGCGACCCA GTTGGTCGAC CTCACCTGTA TCCATCTTGC GGGTGATCGT CCCTTTTGTC TCGAAAAACG ACTTATCGAT CTCGCCGTCG TACCGGAGGC GAAAGGCTTC GACTTTGAGA CAATAGCGCC GGGACCATGG CTCCTGGCAC AGATCCCTTG GACCACTGCG GAACATCGAA TCCAGGCTGT CCGAGCCGGG GCGGAGGAAA CCGAGCATTT GCAACTCTCG CCTAACGATC CCTGCTTGGT GATCGAGCGT CAGACCTGGA GCCACGCGGG GCCGGTGACA AACGTCAGGC TTACATATCC GGGCGACAGG CATCGCCTGG TGGCTCAGTT CAAGCCGAAC TCGTGA
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Protein sequence | MTIEDSSGTT LHQRILNDIE GRIISGAWPP GYRLPFEVDL AVQYGCSRMT VNKVMTQLAK SGLIERRKKS GTFVAHPQAQ SAVLEIHDIR EEVQSLNLSY GYRLLSRTCR KAGTEDLRRL GVSKATQLVD LTCIHLAGDR PFCLEKRLID LAVVPEAKGF DFETIAPGPW LLAQIPWTTA EHRIQAVRAG AEETEHLQLS PNDPCLVIER QTWSHAGPVT NVRLTYPGDR HRLVAQFKPN S
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