Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2956 |
Symbol | |
ID | 4181850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 3216765 |
End bp | 3218135 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 638068840 |
Product | RNA polymerase, sigma 54 subunit, RpoN |
Protein accession | YP_675493 |
Protein GI | 110635285 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATCG CCGTCAACTT GGGGGTTGGC GTCCGCCAAT CGCTGACGAT CAGCCGGGAG ATGGTCCAGG CTGTTGAGAT ATTGCAATAT GACCGTGAAG AGCTGGCAGC ATTCTTGCGG GAGCAAGTAG AAAAAAATCC CCTGCTGCGC ATGAAAGATC GTGCTGAAGC TGCTCCGGGA CAAGGACTTG GCGAGCGCTG GAGGCGCGAC TCCGGCGACA GGGCCTTTGC GACCGGGGCG GCAGGCGATG CTCCGGATAT AGCCTCCTCC ATTGGCGAAG AAGTCACGCT ATCCGCGCAC CTCCACCTTC AGCTTGCCTT GGTAAAGTGC ACGCCAGAAG TGCGGGTCCG CGCCGGTCAA GTGATCGACT CGCTTGAGGA GGACGGATAT CTGCGGCAGG ACCCGGTGAA GCTGGCCGAG CTTCTCGGCT GCTCGCAAGA TGAGATGGAC GCGGCGATTG CTCTTGTGCA GACCTTCGAT CCGGCCGGTG TCTGTGCGCG CAACCTTGCT GAATGTCTGC AGCTCCAGCT ACGGGAGCAG GGGGAATTGC GCCCTGCAAT GGCTGCTTTG CTTACCCACA CCGATCTCAT CGTGAAGGGC GAAGTCAAGC GCCTTGCAGC GATCTGCGGC GTGAGCGAAA GCGAGGTACG CGTAATGCTT CGAAAGTTGC GTAGCCTTGA CCCAGCACCA GGACGCGCGC TGGATTGCAC TCCCGTCTGT CCGGCCTTGC CGGACGTGTT GGTGGATTTG ACGCCAACCG GGGCACTCAA AGTAGAGCTC AATCCGGATC TGATACCGAA GCTGCTGCTG GATCGGAGCT ATCATGCTGA GGTTTCCTCG CAAATACGCG AGAAGGATGA GAAGAGCTAT CTCGACGAAT GCATGCGCAG CGGAGCTCTT CTGATGCGGA ACCTCGATCG GCGCTTCACG ACCATGCTGC GGATCTGTCG CGAGATCGTA CGCCGGCAGG AGGCATATTT CCGGCACGGC TTGTCCCATT TGCGGCCGCT GACTCAGGGC GAGATCGCTC AGGAGCTGGG CATTCATGAA TCGACGGTCA GCCGTGCTAC GGCGAACAAA TACATATTGT GCTCGCGTGG GCTCCTTCCT GTGAAATTTT TCTTTTCGGA GGCTTTGGGC GGCACAGGAA CCGATGGCCT GGGCCATGCC TCCGAAACCA TTCGCCGGCG CATCCGCGAG GTAGTGGACG GCGAAACGCC TGAAAAGATC CTATCCGATG ATGTGATTGC CGCGCTTTTG CACGGTGAGG GGATCGATAT AGCGCGGCGA ACAGTCGCCA AATACCGCAG CCAGCTCAAA ATACCCTCGT CAGCCGATCG GCGGAGACTT GCACGCCTGG AGTGTGCTTG A
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Protein sequence | MNIAVNLGVG VRQSLTISRE MVQAVEILQY DREELAAFLR EQVEKNPLLR MKDRAEAAPG QGLGERWRRD SGDRAFATGA AGDAPDIASS IGEEVTLSAH LHLQLALVKC TPEVRVRAGQ VIDSLEEDGY LRQDPVKLAE LLGCSQDEMD AAIALVQTFD PAGVCARNLA ECLQLQLREQ GELRPAMAAL LTHTDLIVKG EVKRLAAICG VSESEVRVML RKLRSLDPAP GRALDCTPVC PALPDVLVDL TPTGALKVEL NPDLIPKLLL DRSYHAEVSS QIREKDEKSY LDECMRSGAL LMRNLDRRFT TMLRICREIV RRQEAYFRHG LSHLRPLTQG EIAQELGIHE STVSRATANK YILCSRGLLP VKFFFSEALG GTGTDGLGHA SETIRRRIRE VVDGETPEKI LSDDVIAALL HGEGIDIARR TVAKYRSQLK IPSSADRRRL ARLECA
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