Gene Meso_2885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2885 
Symbol 
ID4182883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand- 
Start bp3139067 
End bp3140176 
Gene Length1110 bp 
Protein Length369 aa 
Translation table11 
GC content57% 
IMG OID638068773 
Product4-hydroxyphenylpyruvate dioxygenase 
Protein accessionYP_675426 
Protein GI110635218 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR01263] 4-hydroxyphenylpyruvate dioxygenase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGACCCT TTCCACATGA TGCGCCGCCC GCCACCATCA GCCCGGAAAA TCCGGCTGGT 
ACTGACGGTT TCGAGTTTGT GGAATTTGCC CATCCGGAGC CGGAAAAGCT CGCTGAGTTG 
TTCGGTCGTA TGGGCTTTGT CGCGGTCGCC AAGCACCGGA CCAAGAATGT CACCGTTTGG 
CGGCAGGGCG ATATCAACTA TATCGTAAAT GCAGAGCCCG GCTCCCACGC TTCTCGCTTC 
GTGGAAGAGC ATGGGCCTTG TGCGTCCTCC ATGGCATGGC GCGTGGTGGA TGCCAGGCAC 
GCTTTTGACC ACGCCGTTTC AAAGGGCGCT CAGCCCTATG AAGGCAAAGA CAAGGTGCTG 
GATGTGCCGG CCATCGTCGG CATTGGCGGA TCGCTTCTCT ATTTCATCGA GCGGTATGGC 
GCTAAGGGCT CCGCCTATGA GGACGAGTTC GAGTGGCTGG GCGAGCGCAA CCCGAAGCCG 
GAAGGCGTCG GCTTCTACTA TCTCGACCAC CTGACCCACA ATGTCTATCG CGGCAATATG 
GACAAGTGGT GGGCCTTCTA CCGGGATCTG TTCGGGTTCA AGCAAATCCA CTATTTCGAT 
ATCGACGGTC GCATTACCGG CCTTGTAAGC CGCGCTATCA CCAGCCCCTG CGGCAAGATC 
CGTATTCCGC TGAACGAATC CAAGGACGAG ACAAGCCAGA TCGTCGAATA TTTGAAGAAG 
TACAAGGGCG AGGGCATCCA GCATATCGCG GTGGGAACGG AACACATCTA CGATGCCACC 
GATCGGCTGG CCGATAATGG GCTGAAATTC ATGCCCGGCC CCCCGGATGT CTATTACGAG 
AGATCGTTCC AGCGCGTGGC CGGTCATTCG GAGCCGATCG AGCGCATGAA GAAATACGGC 
ATTCTGATCG ATGGCGAAGG CGTGGTGAAT GGCGGCATGA CGAAGATCCT GCTGCAGATA 
TTCTCCAAAA CCGTTATCGG CCCGATCTTC TTCGAGTTCA TCCAGAGGAA GGGTGACGAG 
GGCTTCGGAG AAGGCAACTT CCGCGCCCTT TTCGAATCCA TCGAAGAAGA CCAGATCCGC 
CGCGGCGTGC TCAAGGAGGC CGCTGTATAG
 
Protein sequence
MGPFPHDAPP ATISPENPAG TDGFEFVEFA HPEPEKLAEL FGRMGFVAVA KHRTKNVTVW 
RQGDINYIVN AEPGSHASRF VEEHGPCASS MAWRVVDARH AFDHAVSKGA QPYEGKDKVL 
DVPAIVGIGG SLLYFIERYG AKGSAYEDEF EWLGERNPKP EGVGFYYLDH LTHNVYRGNM 
DKWWAFYRDL FGFKQIHYFD IDGRITGLVS RAITSPCGKI RIPLNESKDE TSQIVEYLKK 
YKGEGIQHIA VGTEHIYDAT DRLADNGLKF MPGPPDVYYE RSFQRVAGHS EPIERMKKYG 
ILIDGEGVVN GGMTKILLQI FSKTVIGPIF FEFIQRKGDE GFGEGNFRAL FESIEEDQIR 
RGVLKEAAV