| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2810 |
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| Symbol | |
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| ID | 4179689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 3054932 |
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| End bp | 3057241 |
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| Gene Length | 2310 bp |
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| Protein Length | 769 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638068698 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_675351 |
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| Protein GI | 110635143 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAGGC GTGCCACCGA CATTCCAGAT GATGTCTACG TCCAGTTTGT GAGGTCGTTG
TTCGAGAGCA GGATTATGCT GCTCATCGGC GCCTTCTCTC ACATGCTCGT CGCGTTGATG
GCCTATCTCA GAACCGAGCG CCCGCTATTT GCAATACTTT CGGTGCTGTT TCTCGCGGTC
GGTTTCTGGC GCTTCTCGGG ATTGCGTCCC ACCGATGAGG ACCTGGACAA ACTCGATGTC
GAGACGGCGC GCAAATGGGA AGCCAGCTAC GTCGTCAAAG GTGGATTCCA GGGCCTTCTG
CTTGGCTTAT TCGCCTTTTC TTCCGTCTTT CTCTACCCCG ACCAGTTCGC CGAGCTTGGT
GCCCTGGCCA TAAATCTCGC ATCGCTGGTG ACGGTTGTCG GCCGCAATTA CGGCTCGGCG
CGAATGGTGG TGATCTTCAC CACGACAATG ATGGCGCCGA TCATGGCCGG GCTCCTGCTG
CGCGCCGAAC TGCCGTATGT GGTGCTTGGC CTTCTCGTCC TTCCGTTCGG CTATATCGTT
GTGAGAAGCG CGGAGGAGGT GCGGAATATC CTCGCGCGGG CAGTGGAGGA GGGGCGAAAG
GCCGATGAGC TTGCGCGGCG GTTCGACCGT GCGCTGAACA CCATGTCGCA CGGGCTGGTC
ATGTTCAGCC CGCAGGGCCG TGTCGTTGTC GCCAACGCCC AAGCGGCGGA ATTCCTCAGC
TTCCAGTCGT CTCAACAACT CCTCGGCCGA ACGCTCGATG CGCTGCTTAT GCGCGGTCTT
GCGGGCAACA TGTTGAGCCC TAAGGACTTC GACTATGCAC GGGCACAGCT CAGGCGCGCA
CTGAGCAAGG GACGGGGCAG AAAAGTGCTT CTGGCGCTGA CCGACGGGCG GTATATCGAA
TTCTCGGCGC GGGAAGGGCG CGAGGAACTG CGAGTCCTAA CGTTCGAGGA AGTGACGCAG
CGCGTCGAAG CCGAAGCCAA AATCCGGCAC ATGGCGCGGT ATGACAGCCT GACCAACCTG
CCGAACAGGG CGTATTTCCA GGAGCTGGTG AGAGAATTCA TGGCTGCTGG CGACGAGAGT
CGCCTTTGTG GCCTAGCCGT TATGGACCTG GACGATTTCA AGACGATCAA CGATACGCTC
GGCCATCCGG TTGGCGACGG ATTGATCTAT GCGGTGGCGG AGCGCCTGGC GGAGTTCGAG
AGCGGAAGCG TGAAAGTGGG CCGCTTCGGC GGCGACGAAT TCATGGTCTA TTTCGATCGC
GTCGAGGATG AAACGGATTT CGCAAATCAG TTCAACGTGA TCTTCAGCGC ATTGCAGGGC
GAGGTCGATA TCGCTGGCCA TCTGTTAAGA ATCCAGGCGA GCGGCGGCGC TGTCGTTGTG
CCCGTTCGTG ACGGCGATCT GGACATGATC ACTGTCAAAG CAGATCTTGC CCTTTATAAC
GCGAAGGAGC AGGGCAAAAA TTGCTGGCGG CTTTTCGAGG CCGATATGGA CGCCGCTTTC
CGCAGCCGGC AGATAATGAA ATCAGAGCTG CGCAGCGCGA TCCAGTCAAG AAACCTGCGC
GTTGTCTACC AGCCGATCGT AGACGTGCGC ACCATGCGTA TCTCCGATTG CGAGGCCCTG
TGCCGATGGG ATCATCCGGA TCTGGGTCCT GTGTCTCCAG CCATCTTCAT CCCGCTTGCC
GAGGAAATGG GGCTGATCTC GGAAATCAGC GCCTTCGTGC TGGAGGCAGC CTGCCAGGAA
TGCATGAACT GGCCCCAACA TATCGGCGTC TCGGTCAATC TTTCAGCCAA GGATTTTCAG
AGCGGGGCCG TGATCGACAA GGTTCGCGAA ACGCTTAACA AATCCGGGAT AGCCCCCGAG
CGCCTGGAGA TCGAAGTGAC TGAAACGGCG CTGCTCTATG ACAAGGATGC CACGCGTCTT
TATATCGAAG GGCTCAAGGA ACTAGGCATT CGAATCGCCC TCGACGATTT CGGCACCGGC
TATTCGAGCC TGAGCTACCT TCACACGCTT CCTCTTGACC GGGTGAAGAT CGACAGCAGC
TTCCTCCATG ACGTGACGAA GAATCCACGG TCTCACAAGC TGCTGAAGAG CGTCGTGCAG
CTGTCCCGCG GGCTCGGCCT GGACGTGACG GTGGAGGGGG TGGAAACCTT TCAGCAGCTT
AAGCTGCTCG AAACCTCTGT TAAGCCCGAC CGGGTGCAAG GTTTTCTTTT TGGATCCGCT
CTGTCCGCTT CCGGGATCAA AACCATGTCA GACGTGGTCT GGTACGCGGA AGACGGGAAC
ATTCGGCGCG ACAAAAGCTT ACAGCACTGA
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| Protein sequence | MARRATDIPD DVYVQFVRSL FESRIMLLIG AFSHMLVALM AYLRTERPLF AILSVLFLAV
GFWRFSGLRP TDEDLDKLDV ETARKWEASY VVKGGFQGLL LGLFAFSSVF LYPDQFAELG
ALAINLASLV TVVGRNYGSA RMVVIFTTTM MAPIMAGLLL RAELPYVVLG LLVLPFGYIV
VRSAEEVRNI LARAVEEGRK ADELARRFDR ALNTMSHGLV MFSPQGRVVV ANAQAAEFLS
FQSSQQLLGR TLDALLMRGL AGNMLSPKDF DYARAQLRRA LSKGRGRKVL LALTDGRYIE
FSAREGREEL RVLTFEEVTQ RVEAEAKIRH MARYDSLTNL PNRAYFQELV REFMAAGDES
RLCGLAVMDL DDFKTINDTL GHPVGDGLIY AVAERLAEFE SGSVKVGRFG GDEFMVYFDR
VEDETDFANQ FNVIFSALQG EVDIAGHLLR IQASGGAVVV PVRDGDLDMI TVKADLALYN
AKEQGKNCWR LFEADMDAAF RSRQIMKSEL RSAIQSRNLR VVYQPIVDVR TMRISDCEAL
CRWDHPDLGP VSPAIFIPLA EEMGLISEIS AFVLEAACQE CMNWPQHIGV SVNLSAKDFQ
SGAVIDKVRE TLNKSGIAPE RLEIEVTETA LLYDKDATRL YIEGLKELGI RIALDDFGTG
YSSLSYLHTL PLDRVKIDSS FLHDVTKNPR SHKLLKSVVQ LSRGLGLDVT VEGVETFQQL
KLLETSVKPD RVQGFLFGSA LSASGIKTMS DVVWYAEDGN IRRDKSLQH
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