| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2801 |
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| Symbol | |
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| ID | 4179680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | + |
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| Start bp | 3048307 |
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| End bp | 3049182 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638068689 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_675342 |
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| Protein GI | 110635134 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.462521 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAG GTGTAATGGC GCAGAACGCA ACCCATTCCC GAGTGCGAAC GGCTCTGGTG
TTCGTTGCTC TGATGAGCTT GGCAGCTTGC AACACGACCG ATCCCGTGAC GGACCTGACA
CGCATCGACA CCGCGCAGGG ATCGGAGGAA AACATCGCCT CGCTCAGCGC CGTCATCGAG
CGTACGCCAA ACGACCCCGA AGCTTATAAT ATCCGCGGCG CTGCCTATGG GCGGGGCGGC
AATTACCGCG AGGCGCTCAA GGATTTTGAC AGGGCAATTC AGCTCGACCC GCGCTCCTTC
CGGGCTTATG CGAACCGGGC GCTGATCTAT CGTTACATGG GCGATCAGCA GCGGGCGCTA
GCGGATTACA ACCAGGCGAT CGCCCTTAAC GCCAGCTACG ACGTCGCCTA TATCGGCAGG
GGCGAACTTT ACCGCCTCGC CGGGCGCTCC ACGGAAGCCT TCCAGGATTT TGAAAAGGCG
ATCCAACTCG ATACCACGGA CCCGCGCGCA TACCATCGCC GCGGCCTTCT CTATCAAGCA
AGCGGCCAGC ATCAATATGC GATCGAGGAT TTCGCCAAGG CGATCTCCCT CGCCCCCGAT
CAGCCCTATG GCTACAATGG CCGCGGCCTT TCTTATCTCG CCCTGGGCGA TGACGAGAAT
GCCTTCACGG ATTTCAACAC CGCCATCCGT TTGAATGAAC AGCTGGCGGA AAGCTGGGCA
AATCAGGCGC TCGTCTACGA GAAGCGCGGC GAAATGGATA AGGCGGCACG CTCTTATGCG
CGCGCTTTGA GCCTCGATGC CAACTACACA CCGGCCCGCG ACGGCGTCGC AAGAACGCAA
GGTGCGGGCG GCGCGGCGAC GGCATCCAGG ACCTGA
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| Protein sequence | MAEGVMAQNA THSRVRTALV FVALMSLAAC NTTDPVTDLT RIDTAQGSEE NIASLSAVIE
RTPNDPEAYN IRGAAYGRGG NYREALKDFD RAIQLDPRSF RAYANRALIY RYMGDQQRAL
ADYNQAIALN ASYDVAYIGR GELYRLAGRS TEAFQDFEKA IQLDTTDPRA YHRRGLLYQA
SGQHQYAIED FAKAISLAPD QPYGYNGRGL SYLALGDDEN AFTDFNTAIR LNEQLAESWA
NQALVYEKRG EMDKAARSYA RALSLDANYT PARDGVARTQ GAGGAATASR T
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