Gene Meso_2756 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2756 
Symbol 
ID4183008 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp3004121 
End bp3005323 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content60% 
IMG OID638068645 
Productcapsule polysaccharide export protein-like 
Protein accessionYP_675298 
Protein GI110635090 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3524] Capsule polysaccharide export protein 
TIGRFAM ID[TIGR01010] polysaccharide export inner-membrane protein, BexC/CtrB/KpsE family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.415519 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCAGACA ATAATACCGT TCGATTGATG CTGAAGCCCG GTTTCGAAAA GGCGCAGCAA 
TTATCGCTGC CTGCCAGCGC CGGATCTGAA GGGCAGCCAC GCCGCCGCAT TCTGGCCCTT
TCTTTTGCGG TCTGCGTGCT CGTCCCCGCC TTCCTCGCGG CCATGTACTA CGCGTTCATC
GCTTCCGATC GCTATGTTTC GGGGGCAGGC TTTGCCGTGC GCGGCATGGA TTCCAGCGTC
GGCGCGGATT TGTTGGGCGC GTTCACCGGG CTTGCGAATG TGGGGTCCAC CGCCTCCGAT
TCCTATATCC TGCTGGAGTT CCTCGAAAGT CGTGACCTGG TGGAGAAACT GGAGCGCTCT
TTTCCGCTCC GCGATGCCTA TGGCGCGCCC TTTGCGGACT TCCTCTATCG GCTCGATCCC
GACACCGATA TCGAGCATAT GGTCGAATAT TGGGCGGACC GCATCCACAC CATCTTCGAT
ACCAATTCCG GCATTATCAC ATTCCAGGTG GAAGCCTTTC GGCCGGAGGA TGCTGCGCGG
ATCTCCGAAC TTGTTCTGTC CTACTGCAAA ACCCTGGTGA ACGAACTCTC CGCCAATGCG
CGCAAGGATG CCGTTGCCTA CGCCGAAGGC GAGGTGGAGC GCGCGGAGGC CCGGCTGCGC
ACCGCTTTGG AAAAGCTGCG CCAGTTCCGC GTCGAGGAGA ATGCCCTCGA TCCCGGACGC
ATCGCCCAGC TTCAGATCGA GATTGTTGGC GGATTGGAGA AGGAGTTGGC GGAGACCAGA
GCCCGAATCT CCGCGCTCCA GGGCGCGGTA GACGAAAACT CGCCTGCCAT GCGCACCCTC
CGCCGCCATG CGGAAGCGCT GGAGAAGGAA GTGGCCGAGA TGAATGCTCA GGCCAACAAG
GGTGGCAGTG CCGAAGATGA CGGCTCTGCT CTTTCCGGGC TGCTTGCATC CTATGAAACC
CTTGAAGTCG AACGCAACTT TGCCCAGCAG GCCTACACGT CCGCGCTCTC GTCTCTCGAA
CGCGCGCGTG TGGAAGCAGA TCGCCAGCAG CGTTATCTGG CGGTCTTTTC AGAACCCCTG
GTTCCGCAGT ACCCCCTTTA TCCTCAGCGT GTTCTGATTG GCTTTCTCGT CCTGGCCACC
CTCACCCTTC TTTGGGGCAT TGGCGTGCTC GTCGTTTACG CCGTGCGTGA CCATATTTCG
TGA
 
Protein sequence
MADNNTVRLM LKPGFEKAQQ LSLPASAGSE GQPRRRILAL SFAVCVLVPA FLAAMYYAFI 
ASDRYVSGAG FAVRGMDSSV GADLLGAFTG LANVGSTASD SYILLEFLES RDLVEKLERS
FPLRDAYGAP FADFLYRLDP DTDIEHMVEY WADRIHTIFD TNSGIITFQV EAFRPEDAAR
ISELVLSYCK TLVNELSANA RKDAVAYAEG EVERAEARLR TALEKLRQFR VEENALDPGR
IAQLQIEIVG GLEKELAETR ARISALQGAV DENSPAMRTL RRHAEALEKE VAEMNAQANK
GGSAEDDGSA LSGLLASYET LEVERNFAQQ AYTSALSSLE RARVEADRQQ RYLAVFSEPL
VPQYPLYPQR VLIGFLVLAT LTLLWGIGVL VVYAVRDHIS