Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Meso_2740 |
Symbol | |
ID | 4182992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chelativorans sp. BNC1 |
Kingdom | Bacteria |
Replicon accession | NC_008254 |
Strand | + |
Start bp | 2981130 |
End bp | 2982353 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638068628 |
Product | lytic murein transglycosylase |
Protein accession | YP_675282 |
Protein GI | 110635074 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.788715 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTCGCAA CTCGGGCCGT TGTGGGCCTT GTCGGTGTGA AGCTCCTGAT CGCCGCGGCC TTTCTTGCCG TAGGGGTCCA AGCGTCTGCC GCCGACGCGG GCTTCCAGCG CTGGATCGCA CAGTTCCGAA ACGTGGCCAT CCAGAACGGA ATTTCTCCCG GCGTCTATGA CCGCGCGTTT CGCGGCATAA CGGAACCTGA TCCCGATGTG CTGCAAAAGG CGCGTTTCCA GCCTGAATTC CGCGCCGCGC CATGGGAATA TTTCGACAAT AGAATAAACG AGCATACCGT CGCGACCGGT CGCCAGATGG CGCGCCAATG GAAGCCGTGG CTCGACCGGA TTGAGAGCCA ATTCGGCGTC AGCCGGTATG TTCTGCTGGC CATTTGGTCG ATGGAAAGCA GCTATGGTTC GGCGCTCGCG AACGAGCGCA TGCTGCACTA CCTGCCCCGT GCACTCGCCA CGCTCGGCTA TGCGGATTCG CGCCGCGCCA AATTCGCCCG CACGCAGTTG ATCGCCGCGC TCAAGATCCT CCAGCGCGGG GATGTTTCCG AGCGGCATTT CGCCAGCTCG TGGGCAGGCG CCATGGGCCA TACGCAATTC ATTCCCACGA GCTACGAGGC CTATGCGGTT GATATGGACG GCGACGGGCG GCGCGATGTC TGGAGCTCCG TGCCGGATGC GCTTGCATCG GCGGCCAATC TCCTTGCCCG GAACGGATGG CGCGGCGGGG AAACCTGGGG CTATGAAGTT GTCCTGCCGG AGGGGCGCAA ATTCCCCGGC GGCTCCATGC CGCTCAGCCG CTGGGCATCC ATAGGTGTCG TACGGGCGAA TGGCCAGGGC TTTCCCGCCG CTTCGCGGGA TGCCGAGCTC AAAGTGCCGG ACGGGCGCGC AGGCCCAGCT TTCCTGATGA CCAGGAATTT CTTTGTCATC AAACGTTACA ACAATGCGGA CACCTACGCT CTTGCCGTCG GCCTGCTTGC CGACCAGATA GCAGGTTATG GTGGCCTGGT TCGCGACTGG AACCGGCCAT TCGAGCGCCT CTCGTTCGAG GAGACGAGGG AGTTGCAAAA GCGGCTCGGA ACGCTCGGCT ACTATGAAGG CGAGATCGAT GGAAAAGTCG GTCAAGCTTC CCGCGAAGCG ATAAGAGCCT TCCAGTCGCG CATGGGCTTG GCACAGGATG GGCACCCCAG CAAGGAAGTG CTTAACGTGC TGAGAGGTCG TTGA
|
Protein sequence | MFATRAVVGL VGVKLLIAAA FLAVGVQASA ADAGFQRWIA QFRNVAIQNG ISPGVYDRAF RGITEPDPDV LQKARFQPEF RAAPWEYFDN RINEHTVATG RQMARQWKPW LDRIESQFGV SRYVLLAIWS MESSYGSALA NERMLHYLPR ALATLGYADS RRAKFARTQL IAALKILQRG DVSERHFASS WAGAMGHTQF IPTSYEAYAV DMDGDGRRDV WSSVPDALAS AANLLARNGW RGGETWGYEV VLPEGRKFPG GSMPLSRWAS IGVVRANGQG FPAASRDAEL KVPDGRAGPA FLMTRNFFVI KRYNNADTYA LAVGLLADQI AGYGGLVRDW NRPFERLSFE ETRELQKRLG TLGYYEGEID GKVGQASREA IRAFQSRMGL AQDGHPSKEV LNVLRGR
|
| |