| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2677 |
|---|
| Symbol | |
|---|
| ID | 4180240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2907555 |
|---|
| End bp | 2909771 |
|---|
| Gene Length | 2217 bp |
|---|
| Protein Length | 738 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 638068565 |
|---|
| Product | glycogen branching enzyme |
|---|
| Protein accession | YP_675219 |
|---|
| Protein GI | 110635011 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
|---|
| TIGRFAM ID | [TIGR01515] alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.810703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGG CGGCCGATGC AGCTCCATGG AGGCTCGACG ACCCCCATGT TATCGGCGCG
CTGGTGGCGG GCCGGCTTGC AGACCCGTTT GCGATATTGG GGCCGCATCA GACGGCGGCC
GGTCTCGTGC TGCGGGTGCT GCGCCCCGAA GCCGATACGG CGGAGGCAAT CGATCCTGAT
TCCGGCAGTA GCTACGGCAA GCTGCTCAAG CGTCATGCGC GGGGCTTCTT CGAGGGCCTG
ATCTCGAAGA ACACAGCCGT TCCGAGATAC CGGCTTCGTT TCACCCGCGA GGGTGACACC
TGGGACGAAG AGGATGCCTA CCGGTTCCCC AGCACCTTCG GGGACCTCGA TCTATATCTG
CTTGGCGAGG GGCGGCACCA GCGTCTCTAT GAAAAGCTCG GCGCGCATCC GATGGCCTGC
GATGGGGTGG ATGGCACCCG CTTTGCCGTT TGGGCGCCCA ATGCGAGCCG CGTCAGCGTG
GTCGGCAATT TCAACAATTG GGATGGCCGC CGCCATCAGA TGCGGCTTCA TCCGGGGATC
GGCGTCTGGG AAATCTTCGT GCCGGGCGCA AAACCGGGAA ATCTTTACAA ATACGAGATC
ATCGGCCGCA ACGGCGAGTT GCTGCCCCCG AAAGCCGATC CGGTGGGTTT TCGTGCGGAG
GTGCCGCCGG CGACTGCTTC CGTCGTCAAC GGTCTGCCTC AAATGGAATG GGGCGATGGT
GAGTGGGTGG AGCACCGCAT CGGAAAGAAC GATCGGAAAG CCCCGATCTC GATCTATGAG
GTGCATCTGG GTTCCTGGCG CCGCCATGAG GATGGCCGTT ACCTCTCTTA CGATGAACTG
GCCGACCGGC TGCTTCCCTA TGTGAAGGAT CTCGGCTTCA CCCACATCGA GTGCATGCCG
GTGAGTGAGC ATCCCTTTTC CGGTTCGTGG GGGTACCAGC CGGTCGGCCT TTATGCTCCG
ACAAGTCGCT TCGGCACGCC GGAGGACTTT GCCCGCTTCG TCGATCGCTG CCATCATGAA
GGGATCGGAG TCATCATCGA TTGGGTGCCG GCGCATTTCC CTTCGGACGC GCACGGGCTT
GCCCGTTTCG ACGGCACGGC GCTTTACGAG CACGAGGACC CGCGGCTCGG CTTCCATCGT
GACTGGAACA CGCTCATCTA CAATTTCGGG CGACGAGAGG TCGCGAATTT CCTCACCGCT
AACGCGCTTT TCTGGCTCGA CCGGTACCAT GTGGACGGCC TGCGCGTGGA TGCGGTCGCC
TCGATGCTTT ACCTCGACTA CAGCCGCCAG CCAGGCGAGT GGATCCCCAA CAAACACGGC
GGCAACGAGA ACCTCGAGGC GATCGCATTC CTCAGGGAAA CGAACACGGC GCTTTTCGGC
TCCCACCCCG GCACCACATC GATCGCGGAA GAATCGACGG CTTTTCCCGG TGTTTCCCGG
CCGGTCTATG CCGGAGGGCT TGGCTTCGGC TTCAAGTGGA ACATGGGCTG GATGCACGAC
ACGCTGGATT ACATGCAGCA CGAGCCGATC CATCGCCAGC ATCATCACGA CCGCATGACC
TTCGGCCTGA TTTATGCCTT CTCGGAAAAC TTCATCCTGC CGCTCAGCCA TGACGAGGTG
GTGCACGGCA AGGGGTCCCT GATCGGCCGC ATGCCCGGCG ACCGGTGGCA GAAATTTGCG
AATCTGCGCG CCTATTTCAC CTTCATGTGG ACTCATCCCG GCAAGAAGCT TCTCTTCATG
GGCGGAGAAT TCGCCCAGGA GCGCGAGTGG AACCACGACT GGCAGCTCGA CTGGCACCAT
CTGGACGATC CGATGCACCG GGGCGTGCAC GATCTCATCC GCGATCTGAA CCGGATTTAC
AGGAGCGAGC CTGCGCTGCA TGAGCTCGAT TGCGAGCCCG AAGGTTTCGA GTGGATCGAT
GCCTCGGACC CCAGCATCAG CACCTATGTC TACATGCGAA AGGGGACCGG CGGTGCGCGG
CCGGTGGTCG TGGCCTGCAA CTTTACGCCG GTCGTGCGCG AGAACTTCCG CATCGGTTTG
CCGAACGCAG GCATCTGGCG GGAGATCCTG AACAGCGACG ACCGCCGCTA TGGAGGCTCG
GACGTCACCA ACGGAACTGT AACCGCGACC ACCGACGAGC CGTGGCACGG CCGGCCTGCT
TCAGCGATCC TGAGGCTGCC CCCGCTGGGC AGCGTCGTGC TTGTGGGTGA AGCGTGA
|
|---|
| Protein sequence | MSAAADAAPW RLDDPHVIGA LVAGRLADPF AILGPHQTAA GLVLRVLRPE ADTAEAIDPD
SGSSYGKLLK RHARGFFEGL ISKNTAVPRY RLRFTREGDT WDEEDAYRFP STFGDLDLYL
LGEGRHQRLY EKLGAHPMAC DGVDGTRFAV WAPNASRVSV VGNFNNWDGR RHQMRLHPGI
GVWEIFVPGA KPGNLYKYEI IGRNGELLPP KADPVGFRAE VPPATASVVN GLPQMEWGDG
EWVEHRIGKN DRKAPISIYE VHLGSWRRHE DGRYLSYDEL ADRLLPYVKD LGFTHIECMP
VSEHPFSGSW GYQPVGLYAP TSRFGTPEDF ARFVDRCHHE GIGVIIDWVP AHFPSDAHGL
ARFDGTALYE HEDPRLGFHR DWNTLIYNFG RREVANFLTA NALFWLDRYH VDGLRVDAVA
SMLYLDYSRQ PGEWIPNKHG GNENLEAIAF LRETNTALFG SHPGTTSIAE ESTAFPGVSR
PVYAGGLGFG FKWNMGWMHD TLDYMQHEPI HRQHHHDRMT FGLIYAFSEN FILPLSHDEV
VHGKGSLIGR MPGDRWQKFA NLRAYFTFMW THPGKKLLFM GGEFAQEREW NHDWQLDWHH
LDDPMHRGVH DLIRDLNRIY RSEPALHELD CEPEGFEWID ASDPSISTYV YMRKGTGGAR
PVVVACNFTP VVRENFRIGL PNAGIWREIL NSDDRRYGGS DVTNGTVTAT TDEPWHGRPA
SAILRLPPLG SVVLVGEA
|
|---|
| |