Gene Meso_2608 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2608 
Symbol 
ID4179962 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2815031 
End bp2815810 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content59% 
IMG OID638068501 
Productpentapeptide repeat-containing protein 
Protein accessionYP_675155 
Protein GI110634947 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCTT TTGCTCAGAG TGGCGGCAGG ATCTGCCATC CGGTCATATC GCGGCCATTC 
ACCTCCCTGC CCTCGATAGA CCGTTCAAAG CCGCTCCCGG TCGGGGATGT GCAAGCGTTT
CTCGCCGGCG AGACAAAGGA CTGCCCTGGC TGTGACCTGA AAGGGGCACA ATTGCAACGA
CGCGAACTCT CAGGCGCGGA TCTTCGCGGC GCGGACCTGT CAGGTGCGTC GCTGCATCGT
GCGTCGCTCG CGGGAGCACG TCTCGACGCC GCAAACCTTT CTGGCGCCAA TCTGAACCTG
ACGGATCTCA AGAACGCCTC GCTGATTGAA GCAAACCTCA ATCAGGCGCT GCTCTATAGT
GCCGATCTGA GTCGCGCGGT CCTCACGCGC GCGGATCTCA CTTGGGCCCG CCTGCAGCAT
GCTCGCCTGA CACAGGCGCA ATTACAGGAA ACCAAACTCG TCCACGCCAT GGCGATGCAA
GCAAATTTCA CCGGTGCTGA CCTGCGAAAG GCCGATCTGC AGCTATCCAA CCTGCAAGGT
GCCAATCTCC AGCGGACGGA CATGCGAAGC GCGGTGCTGA CGAATGGAGG GTTCATCGAG
GTGAATTTCA CGTCAGCTGA CCTCAGCCTC GTCAACGATT TCAATGCTGA TTTCATGTCC
GCCAATTTTA CCGATACCCG GATGGTCAAC GCGGACCTTC GAGGTATGCG GCAGGACGGC
GCCACATTTG CTTGCGTGCG GATTGAAAAC GCACTTATGG GCCCAGCGAC GGCAAACTGA
 
Protein sequence
MSAFAQSGGR ICHPVISRPF TSLPSIDRSK PLPVGDVQAF LAGETKDCPG CDLKGAQLQR 
RELSGADLRG ADLSGASLHR ASLAGARLDA ANLSGANLNL TDLKNASLIE ANLNQALLYS
ADLSRAVLTR ADLTWARLQH ARLTQAQLQE TKLVHAMAMQ ANFTGADLRK ADLQLSNLQG
ANLQRTDMRS AVLTNGGFIE VNFTSADLSL VNDFNADFMS ANFTDTRMVN ADLRGMRQDG
ATFACVRIEN ALMGPATAN