Gene Meso_2531 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMeso_2531 
SymbolproX 
ID4179290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChelativorans sp. BNC1 
KingdomBacteria 
Replicon accessionNC_008254 
Strand
Start bp2710185 
End bp2711213 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content60% 
IMG OID638068420 
Productglycine betaine transporter periplasmic subunit 
Protein accessionYP_675080 
Protein GI110634872 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.694403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTAA ATTTCAAAGC TCTTTCTGTC GGCGCGCTGA TCGCGCTCGC TCAGGCAATA 
CCGGCGGCGG CAAACGATCT GCCGGGCGAC GGCAAGACTG TCCATTATGC TCAGTCCGAT
TCGGTCGGTG CCAACTACAT CGTGGCCGAA ATCGTGACCG AAGCGCTTGA GCAGCTTGGT
TACAGCGTTA CGATGACCAC AATCAACACG ACGCTGTTCT TCCCGGCCGC CGCGAGGAAA
GATCTCGACT TGGCCACCGA TGTGAATTTT CCGCAGCGCG AGCCCATTTT CCGTCAGGTG
GAGGACAAGG TCCAGCTTAT CGGCAAAGGT CTTATTCAGG GCGGCGGCAT CAACGGCTAT
CTGATCGACA AGAAGACCGC CGACGAATAC GGGATCACCT CTCTCGAACA GATGAAGGAT
CCGAAAATCG CTGCGCTGTT CGGCACTAAC GGGAAGGCCG ATCTGATTAA CTGCGATCCG
GGCTGGAGCT GCGGTGATGT GGTCGAATAT CAGCTCAAGG AATTCGGCCT GCAAGACACC
GTCAACTCGG TGCGCGGAAA ATACGACACG CTGATGGTGG AAACCATCGC GCGGGTCAAC
CGCGGTGAGC CGGTATTCTT CTACACCTGG AGCCCGTCCT GGATTAACAA GGCCTTGGAG
CCGGGCGAAA AGGTAGTCTG GCTGCCCACC CCCTTCGATG CGCTACCACC CGATGTTCCG
AACGCGGGCT CGGCTCTGGT CCCCGGCGTG AAGGGCTGCG CCGGCGGTGC CGATCCGTGC
CGCATGGCCA TGGCGGCCTG GAACTGGAAT TCCGTTGCCA ACAAGGATTT CATCAAGGAG
AACCCTTCCG TCGAGGCCCT CATCTCTGAA ATGTCCTTCC CGCTGGAGAC CTGGTCCGCC
TGGGAAGTGG GGATTAGCGA GCAGGGCGGC AGCACCCCCC GCGCGATCCG CGAGGCGGCC
GAGAAGTGGA TCTCTGAGAA CAAGGAAACC TTCGAGGGCT GGCTCGCGCG CGCCCGCGCA
GCCTCCTGA
 
Protein sequence
MRLNFKALSV GALIALAQAI PAAANDLPGD GKTVHYAQSD SVGANYIVAE IVTEALEQLG 
YSVTMTTINT TLFFPAAARK DLDLATDVNF PQREPIFRQV EDKVQLIGKG LIQGGGINGY
LIDKKTADEY GITSLEQMKD PKIAALFGTN GKADLINCDP GWSCGDVVEY QLKEFGLQDT
VNSVRGKYDT LMVETIARVN RGEPVFFYTW SPSWINKALE PGEKVVWLPT PFDALPPDVP
NAGSALVPGV KGCAGGADPC RMAMAAWNWN SVANKDFIKE NPSVEALISE MSFPLETWSA
WEVGISEQGG STPRAIREAA EKWISENKET FEGWLARARA AS