| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2428 |
|---|
| Symbol | |
|---|
| ID | 4182212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2603909 |
|---|
| End bp | 2605582 |
|---|
| Gene Length | 1674 bp |
|---|
| Protein Length | 557 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638068317 |
|---|
| Product | respiratory-chain NADH dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_674977 |
|---|
| Protein GI | 110634769 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG1905] NADH:ubiquinone oxidoreductase 24 kD subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC AGGAAAGGCG GCCACGGGAT CGCGGACCCA AGGGGCGGGC GCTCGACGAT
GCCGCTCTTG CCGAGGTCAG GACGCTGCTT GGTACACGCG AGCGCCGGCG TGACCTGCTC
ATTGAGTTCC TGCACCTGAT CCAGGATCGT TACGGCTGTC TTTCGGCGCG GCATCTGCGT
GCGCTGGCCG AGGAAATGCG GCTGTCTCAG GCGGAAGTCT ATGAAGTGGC GACCTTCTAC
GACCACTTCG ACGTGGTGAA GGAAGGAGAG GCGGCGCCGC CGGCGCTGAC GATCCGGGTT
TGCGATTCGG TAAGCTGCAT GCTTGCGGGC GCCGAGACGC TCATCGCCGA GTTGCAGGCA
GGCGCCGATC CGGCGGCTAT CCGTATCATG CGGGCACCCT GCATGGGGCG CTGCGCCGGG
GCGCCCGCCG CCCGCGTCGG AGATCGCGAG GTTGACGGAG CGACTGCCGA GGGCCTGCTT
GGCATGGCGG CTGCCGGCGA GACGGGGGTC AAGGTGCCCG AGTATATCGG GCTCGATGCG
TATCGCGGGG CAGGGGGCTA TCAGCTCCTG CAGAAGATCC GTGAGCGCGC CGTGACCATC
GACGCCGTCA TAGCCATGCT GGGCGATGCA GGTCTGAGGG GCCTTGGCGG CGCCGGTTTC
CCGGCGGGCA AGAAGTGGCA GATCGTGCGC TCCTATCCCG GCCCGCGCCT GATGTCGATA
AACGGCGACG AGGGTGAGCC CGGCACCTTC AAGGACCGGA TTTATCTCGA ACGTGATCCC
CACCGTACCT TTGAGGGCGC GCTGATCGCC GCGTATGCGG TGGAGGCCGA GCGGATCTAT
TTCTACATGC GCGACGAATA TCCGGCGGTG CTGGCCATCC TGCGCGCCGA GATCGCCGCG
CTCGAGGCTG CCGGCATTGT TGCGCCGGGC TTTATCGAAC TGCGCCGCGG CGCCGGCGCC
TATATCTGCG GCGAGGAGAG CGCGATGCTG GAGAGCATCG AGGGGCGGCG CGGAATGCCG
CGCCACAGGC CGCCCTATAT CGCCGAGGTT GGTCTGTTCG GCCGCCCGAC GCTCAACCAC
AATGTCGAGA CGCTGTGGTG GATCCGCGAC ATCGTCGAGA AGGGGCCGGA CTGGTTCGCC
GGCCTCGGCA AGCCGGGCCA TCCGGGCGTC CGCTCCTGGT CGGTTTCCGG ACGGGTGAAG
GAGCCGGGTG TAAAGCTCGC ACCTGCTGGT GTCACTGCGC GTGGGCTGAT CGAGGACTAT
TGCGGCGGCA TGGCAGATGG CCACGAGTTC AAGGCCTATC TTCCCGGCGG GGCCTCCGGT
GGTATCCTGC CTGCCGCGCT GGGCGACATC CCGCTCGATT TCGGCGGCGA ACTCGCCAAG
CAGGGCTCCT TTGTCGGATC GCATGCGGTC GTGGTGTTCT CGCAGGCGGA TAACCTCAAG
GACGTGACCC TCAATCTCAT GAACTTCTTC AAACATGAGA GCTGCGGGAA GTGCACGCCT
TGCCGGGAGG GAACCGAAAA GATGGTCACG CTCCTTAAAG AGCCAGGCCC GCTGCGCGAA
ACCGCGATAC GTGACCTGGA AACGGTCATG CGCGACTCAT CGATCTGCGG CCTCGGCCAG
GCCGCGCCCA ACCCGGTCAA TCACCTCCTG ACCCATTTCT GGGATGATCT TTGA
|
|---|
| Protein sequence | MTMQERRPRD RGPKGRALDD AALAEVRTLL GTRERRRDLL IEFLHLIQDR YGCLSARHLR
ALAEEMRLSQ AEVYEVATFY DHFDVVKEGE AAPPALTIRV CDSVSCMLAG AETLIAELQA
GADPAAIRIM RAPCMGRCAG APAARVGDRE VDGATAEGLL GMAAAGETGV KVPEYIGLDA
YRGAGGYQLL QKIRERAVTI DAVIAMLGDA GLRGLGGAGF PAGKKWQIVR SYPGPRLMSI
NGDEGEPGTF KDRIYLERDP HRTFEGALIA AYAVEAERIY FYMRDEYPAV LAILRAEIAA
LEAAGIVAPG FIELRRGAGA YICGEESAML ESIEGRRGMP RHRPPYIAEV GLFGRPTLNH
NVETLWWIRD IVEKGPDWFA GLGKPGHPGV RSWSVSGRVK EPGVKLAPAG VTARGLIEDY
CGGMADGHEF KAYLPGGASG GILPAALGDI PLDFGGELAK QGSFVGSHAV VVFSQADNLK
DVTLNLMNFF KHESCGKCTP CREGTEKMVT LLKEPGPLRE TAIRDLETVM RDSSICGLGQ
AAPNPVNHLL THFWDDL
|
|---|
| |