| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2375 |
|---|
| Symbol | |
|---|
| ID | 4179870 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | + |
|---|
| Start bp | 2528875 |
|---|
| End bp | 2530419 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638068266 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_674926 |
|---|
| Protein GI | 110634718 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTGAATC GCCGGCAACT GATGTTTGGG GCCGCAGCCA TGGGATTAAC CGGCTCGCTC
GCATTTCGGG CTTACGCTCA GAGTGCAGCG GCAGGCGAAG GCACACTTAC TTTCGGAACG
CTTGGTCTTC TCGCCGGGCT TGATCCGCAT GTTGCCGCCA GCTCGGTGTG GCGCAAGACC
ACGACGATGA TTTACGATCG GCTGCTCGGC TACGACACGA CTGGAAAGTT GCAGGGCGAG
CTCGCCGAAA GCTGGGAGTT CAGCGATCCG ACCACCTTCG TCGTCAAGCT GAAACCGGGC
GTGACCTTCC ACAAGGGGCA GCGGTTCAGT GCCGCAGACG TCGTTTACAC GTTCTCGCGT
ATACAGGATC CTGCGGTGGG TGCGACGTTA GCAAAGCCGC TGGAGGGCGT CGAAGTGGAA
TCGCGTGATG ACGCGACCGT TGTCTTCAAG CTGCCGCAAC CCGACGTGAG TTTTCCAAGC
CTGCTCGCCT CGGAAGAGGT GGCGATCGTT TCAGCCGAAT GGATGGCCGG TTCGCCGAAC
GTCTCGGTTG AAGCGAACGG AACCGGTCCA TTCATGCTCG AAAGCTTCGA TCCGAAAGTC
CAGACGGTGG TCAAGCGCAA TCCCGACTTC TATGATGGTC CGGCCAAGCT GGAAAGCATC
ATCTTCCGCT CGATCGCCGA CGACAGCGCT CGAATAAACG CGCTCAAGAC CGGCAGTGTG
GATCTGATCG ACACAGTCCC ATGGAATCAG ATCGATGGTT TGAAGAATGC GCCCGGATTA
ACTGTGTTCT CGGCGCCGGC AGCATTCATG AGCCTTTGGT GCAACGTCTC TCGTCCGGTA
ATGGCCGACC CGAGAGTCCG TCGCGCAATC GCCTATGCGA TCGACCGCAA CGCAGTGTCG
ACGGCAGCCT TTTTTGGCTA CGGCGCGCCA TTGGGCGGGC TTCCCATGCC GGAGACGTCG
CCTTTTCATA ATCCGGAATC GGCAGAAATC TTCAACTACG ATCCGGAAAA GGCACGTGCT
CTGTTGAAGG AAGCCGGCGC GGAAGGACTG GAGATCGAAT TCCTCGTCTC TCAGGCTCCG
GCAGTCTATG TGGTGGTGGG GCAGATCGTC GCCGCGAATC TGGCTGCGGT GGGCATCAAG
GCGAATATCC AGTTGGTTGA TTTCCCCACC GTGGTCGAGC GGAAGAACTC TGGCAACTAC
GATCTCGTTA TCTATGGCAC GAACATCCGC GGCCCAGACC CGAACCTTGC CTATTCCTAT
TTCTTCGAGC CTGGTACCGG CTTCTGGGCT AACGGCGCCA AGTTCCAGGA CCCCAAGGTG
AGTGATCTCC TGGCGAGGGG CCGGTCCGAA CTCGACTCCG AGAAGCGGAA GGAAGTCTAC
AAGGAGCTCG AACTTTACCT GCTGGAGATC AGCCCTTGGA TCTTCATCAC CTGGCGCGAC
GACGCCATGG CATACAAATC ATCGCTGCAG GGAATGGCAC ATCTCGAGGG AGCTCTGAAC
GTCGTCAGCG TTTCCATTTC CGCACCGCAC CTATTCTGGT CATAA
|
|---|
| Protein sequence | MVNRRQLMFG AAAMGLTGSL AFRAYAQSAA AGEGTLTFGT LGLLAGLDPH VAASSVWRKT
TTMIYDRLLG YDTTGKLQGE LAESWEFSDP TTFVVKLKPG VTFHKGQRFS AADVVYTFSR
IQDPAVGATL AKPLEGVEVE SRDDATVVFK LPQPDVSFPS LLASEEVAIV SAEWMAGSPN
VSVEANGTGP FMLESFDPKV QTVVKRNPDF YDGPAKLESI IFRSIADDSA RINALKTGSV
DLIDTVPWNQ IDGLKNAPGL TVFSAPAAFM SLWCNVSRPV MADPRVRRAI AYAIDRNAVS
TAAFFGYGAP LGGLPMPETS PFHNPESAEI FNYDPEKARA LLKEAGAEGL EIEFLVSQAP
AVYVVVGQIV AANLAAVGIK ANIQLVDFPT VVERKNSGNY DLVIYGTNIR GPDPNLAYSY
FFEPGTGFWA NGAKFQDPKV SDLLARGRSE LDSEKRKEVY KELELYLLEI SPWIFITWRD
DAMAYKSSLQ GMAHLEGALN VVSVSISAPH LFWS
|
|---|
| |