| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2369 |
|---|
| Symbol | |
|---|
| ID | 4179864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chelativorans sp. BNC1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008254 |
|---|
| Strand | - |
|---|
| Start bp | 2522019 |
|---|
| End bp | 2523140 |
|---|
| Gene Length | 1122 bp |
|---|
| Protein Length | 373 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638068260 |
|---|
| Product | spermidine/putrescine ABC transporter ATPase subunit |
|---|
| Protein accession | YP_674920 |
|---|
| Protein GI | 110634712 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
|---|
| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATATAG CTCATCATCA GGTGCCCGCC GGCGATACGG CGCAGCCCAA GGTTTGGCTG
GAGAACGTCA GCAAGCAGTA CGGCTCGGTG ACCGCACTTC AGCCATCGGA CCTCAAGGTC
CGGTCGGGCG AGTTCCTCAC TATTCTTGGG CCGAGCGGCT CGGGAAAGTC GACGGTGCTG
AACCTGATCG CCGGAATGAC CAACCCCACG GCAGGACGGG TCTGGATCGA CGGCCGTGAC
TGCACCAATG TCCCCCCAAG CAAACGCGGC TTGGGTATGG TGTTTCAGAA CTATGCCTTG
ATGCCGCATA TGAGCGTATT CGAGAACGTG GCTTTTCCCC TCCGCGTACG CAGGGTGACG
GAAGCCGAGA TCAAGCGCCG GGTCGGCGAG GCGCTGGAAC TCGTCCGCCT GCCTAGCGTT
GCCGGGCGCA AGCCCGCCGA ACTGTCCGGA GGACAACAGC AGCGCATCTC GATCGCGCGC
TGCCTCGTCT ACAATCCCGC CATCATCCTG ATGGACGAGC CGCTTGGTGC TTTGGACAAG
AAGCTGCGCG AGGAAATGCA ACTCGAGCTG AAGCGCCTGC ACGTTGAATT GAAGGTGACG
GCGCTTTATG TGACGCATGA TCAGGAAGAA GCACTGACCA TGTCGGATCG CATCGTCCTG
TTCAATGGCG GCAGGATCGA GCAGGCTGGC ACACCGCACG AACTGTATTT CCGTCCCAGA
ACTCTCTTTT CGGCGAAGTT CCTCGGCGAC TCCAACGTCC TCTCCGGCAA GCTCCAGGGC
CGGGCGCAAG ACGGCCTTGT CGAGACGCCG GTGGGGCTGT TGCGCAGCTC GAACGGCAAC
GAGCATGTAG GCGACGGCGC GTCCGTGCAC CTGATGGTTC GGCCCGAGAA TGTGCTGCTG
CTGCCTCCGG ACAATAAGCA CGAATATGCG AACGGGTTGG AGGCGATGGT CGTCGACACC
ATTTCCTTTG GTGGCGTGAT CAAGACATTC GCCCGGCTTT CGGATGGCTC CACCATGACC
GTTCAGGAGC TTACTCGCGC GCGGCGGCAG GCTTTCGATC GTGGTGCGCG TGTTCGGTTG
GCCTGGCAGG CTGAGGACAT GCTGCTTTTG CCGGCGGCGT GA
|
|---|
| Protein sequence | MYIAHHQVPA GDTAQPKVWL ENVSKQYGSV TALQPSDLKV RSGEFLTILG PSGSGKSTVL
NLIAGMTNPT AGRVWIDGRD CTNVPPSKRG LGMVFQNYAL MPHMSVFENV AFPLRVRRVT
EAEIKRRVGE ALELVRLPSV AGRKPAELSG GQQQRISIAR CLVYNPAIIL MDEPLGALDK
KLREEMQLEL KRLHVELKVT ALYVTHDQEE ALTMSDRIVL FNGGRIEQAG TPHELYFRPR
TLFSAKFLGD SNVLSGKLQG RAQDGLVETP VGLLRSSNGN EHVGDGASVH LMVRPENVLL
LPPDNKHEYA NGLEAMVVDT ISFGGVIKTF ARLSDGSTMT VQELTRARRQ AFDRGARVRL
AWQAEDMLLL PAA
|
|---|
| |