| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2333 |
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| Symbol | |
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| ID | 4180063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2486375 |
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| End bp | 2486920 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638068226 |
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| Product | TraF peptidase |
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| Protein accession | YP_674886 |
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| Protein GI | 110634678 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4959] Type IV secretory pathway, protease TraF |
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| TIGRFAM ID | [TIGR02771] conjugative transfer signal peptidase TraF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.530383 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCCCCT TCGGCTACGT CATGGTGACG TATTTCGCGA CGATGGGCGT TGCCGTCGCC
CCGTTGATCC CGACGTCCGT GAAACTGATT TGGAATGCTA GCGCGAGCGC GCCGATCGGG
CTCTATACCG TTGAGGCGGC CGACCGGCTC GCGGTGCCCG ATCTGGTCGC CGTTGATCCG
CCCGAACCGC TGGCGCGCTT CATGGTGGAG CGCGGCTATC TGGCGCGCGG TGTGCCGCTT
CTGAAGCGCG TCCTCGGTTT GCCGGGACAG CGCGTTTGTC GCTCCGGTCG CACCATCACC
GTCGATGCAG TCGAAATGGG CGAGGCGCTG GAGCGCGATC GTTTCGGCCG CAAGCTGCCC
GTCTGGCTGG GCTGCCGCGT GATCGCGGAC GGCGAAATCT TTCTCATGAA CTGGGAGGTC
CGGGACAGCC ACGACGGTCG CTACTTCGGA CCGATCCCCG CAAGCTCCGT CATCGGCCGG
GCGACACCGC TCTGGACCGA CGAGGAGGGC GACGGTCGCT ACCAATGGCG CGCGCCGACG
CACTGA
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| Protein sequence | MTPFGYVMVT YFATMGVAVA PLIPTSVKLI WNASASAPIG LYTVEAADRL AVPDLVAVDP
PEPLARFMVE RGYLARGVPL LKRVLGLPGQ RVCRSGRTIT VDAVEMGEAL ERDRFGRKLP
VWLGCRVIAD GEIFLMNWEV RDSHDGRYFG PIPASSVIGR ATPLWTDEEG DGRYQWRAPT
H
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