| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Meso_2315 |
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| Symbol | |
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| ID | 4180846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chelativorans sp. BNC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008254 |
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| Strand | - |
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| Start bp | 2469178 |
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| End bp | 2470368 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638068208 |
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| Product | conjugation TrbI-like protein |
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| Protein accession | YP_674868 |
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| Protein GI | 110634660 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00715823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGA ACGAGAGCAG GCAACAGCAC GAAGATGTGC CGCTGACGGG TTCGACCTCC
AACGCTGCAG CCATGCGGCT GCGCGCGGAG CCGCCGCGCG TGACCCGCCT GTCACGCAAG
GTGCTCGCCT GCATCGGTGT TGTCGCTTCG CTGGGCATCG GCGGCGCGCT GATCTATGCG
CTCCAGTCCC GCCATGCCAA CACAAGCAAC GAGGAGCTGT ATTCCACCGA GAACCGGCCG
ACAGCCGATG GCCTCGCCAG CCTCCCTCGC GACTACACAG GTCCGGTGCT CGGCCCCCCA
CTGCCCGGCG ATCTTGGTCG ACCGATCGTC GATGCGCAGA CCCGCGGGCA ACCGGTGGTA
CCACCCGCCA TGGCGACGCC GACCGTCGAT CCGGAAGAAC AGAAGCGTCT GGCCGAAGAG
GAGGCCGCGC GCACCAGCCG CGTCTTCTTT CAGACCGAGG CGCGGACGGC GGTCGCCGGA
CCGCCCGGCG TCGCCACGAC GCCGAACCTT GTCGGTTCCG GACTGCCTTC CCAGCCGGAC
ACGCCGACGG CGCAGGATCG CCAGCTCGCT TTCATCAATG CCGCCGTCGA CCGGCGCACC
GTCGCGCCCG ATCGCGTCAT GCCGCCGGTC TCGCCATACG TGCTCCAGGC CGGCTCTGTC
ATCCCGGCGG CGCTTATCAC GGCTATCCGT TCCGATCTGC CCGGCCAGAT CGCAGCGCAG
GTCACGGAGA ACGTCTACGA CAGCCCAACC GGCAGGTTGC TCCTTATCCC GCAAGGCACG
CGCGTCATCG GCGAATACAG CAACGATGTC AAATTTGGTC AGCGCCGCGT GCTGCTTGTC
TGGAGCCGGC TGATATTTCC CAACGGTCGC TCCATCGTGC TGGAGCGCCA GCCGGGCGCC
GATGCCCAAG GCTACGCCGG ACTCGAGGAC GGTGTCGATT ATCATTGGTG GGGTCTCGCC
AAGGCCGCCG GCCTTTCGAC GCTGCTCGCG GTCGGCGCCG AACTGGCGAT CGATAATGAA
GATCGTCTGC TCAGTGCCAT CCGCAACGGC GCCCAGGACA CCATCAACGA TGCCGGCCAG
CAGATCATCC AGAGGCAGTT GCAGGTGGCG CCCACGCTGA CGATCCGGCC GGGCTTTCCC
GTCCGCATCG TCGTCACGCG AGATCTCGTA CTCGAACCCT ACGGACGCTG A
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| Protein sequence | MSENESRQQH EDVPLTGSTS NAAAMRLRAE PPRVTRLSRK VLACIGVVAS LGIGGALIYA
LQSRHANTSN EELYSTENRP TADGLASLPR DYTGPVLGPP LPGDLGRPIV DAQTRGQPVV
PPAMATPTVD PEEQKRLAEE EAARTSRVFF QTEARTAVAG PPGVATTPNL VGSGLPSQPD
TPTAQDRQLA FINAAVDRRT VAPDRVMPPV SPYVLQAGSV IPAALITAIR SDLPGQIAAQ
VTENVYDSPT GRLLLIPQGT RVIGEYSNDV KFGQRRVLLV WSRLIFPNGR SIVLERQPGA
DAQGYAGLED GVDYHWWGLA KAAGLSTLLA VGAELAIDNE DRLLSAIRNG AQDTINDAGQ
QIIQRQLQVA PTLTIRPGFP VRIVVTRDLV LEPYGR
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